Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02839 ATGAATTCAGAGGAAGCTGCACAAATTCCCAGAAGAACTACAAGGTCTTTAGCTTCATCTTCTGCGTCGACTTCTAATAATGCATCTTCTGCAAAAGTAAATAGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGAGGAGACCCTATTAGCCTAGATGAATTGTTTTCTAATTTCCCCGGTAGAAGTAGCCAGATTCTCGAGATTGTAAGTCTTTTGGGGCCATTGAACACTCCAATGCTTCCTTTGTTTGTGTATGGTGGTGCTTCCACTGGAAAAATCAGTATCATTCTTCAATTATTCCGGCATCTCAACAGGCCTCTTGTTTATTCTAGCTGCAGGACGTGTTATAATCAGCGTATCTTGTTTGAATCTATTCTAAATCAGTTGCATCTCCATAGAAAAAGTTCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTATGGAAGCATTGACCGATGCCATAAACAATCTGAAGGAGAAGTCGGAGAAGTTGATATCAGGCAAGACAATGGCACAAGGGGGGATTGGAAACATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGAGAGTGGGATAAGAGCTCTACTTTATTACCCTTTCTGTTTAATCTCTATGATCTGCTGAAGATTCCTGAGGTGGATGCTGATCTTCGCAAAATATTGTTGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGATGTGGCTTTAAGGTCTTTCTTTAGGGTTACTAGGCAGGTTGATGAATTGTCCACTGCCTTCAAACCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAAAGAGTCTTTCTTAATGGAGACAAAGACAAAGACATGAAGAGAAAGTTATTTAGTCATATCAATCCTCACATCACGTCCTCTCTGAATGAGATATTTAAGGTTTCATCTCATCCTTCAGCTGAAGTTGAGAACTCCAAAGAGGCAAATCTGAAGGTGAATCAAAAGAAACTGGAGCGACGTGAAGAAATTGCCAAGCTAGACTTTCACATGTCTACGAGTGCGAAGTATCTTCTTATTTCAGCATTTCTTGCTTCCCGAAATCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTGATAATCGAAAGCGAAAGAGGAAAAAGGAAAGTTTAGAAGAGGAGTTACTAATGAAAGGACCTGGAAGTTTCCCACTGGGGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCGGTTGCAGAAGATTCGTCGGATGAGGACAAACAAAGCGGCGAGCTGATGTCTGATGTTCTGTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTTAAAGGAAGAAGCTGTCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTGTATCAGAAGACTTGGCTTTGAAGGGTCTCTCTGAATTTAGGAGGGAATTGTGTATCACTGCCAATGCTTTCATGGACCATATGCATTTGATGCTGCTGCTAGAGAAGCTTAATCCTGATCCCAAACCTCGTTTGATTAGTGGATGTATTATCTGGTTGTCTGGAATTGAAATTTGA 1593 0.4005 MNSEEAAQIPRRTTRSLASSSASTSNNASSAKVNSLEPLTINDLLVGGDPISLDELFSNFPGRSSQILEIVSLLGPLNTPMLPLFVYGGASTGKISIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLHLHRKSSANGYSNAKRCERPSDFINFLMEALTDAINNLKEKSEKLISGKTMAQGGIGNMIYLVFDNFQLVREWDKSSTLLPFLFNLYDLLKIPEVDADLRKILLRNQADSKLYSSFLDVALRSFFRVTRQVDELSTAFKPLYEKYCEPLSDKRVFLNGDKDKDMKRKLFSHINPHITSSLNEIFKVSSHPSAEVENSKEANLKVNQKKLERREEIAKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKKESLEEELLMKGPGSFPLGRLLAIFQCIVSVAEDSSDEDKQSGELMSDVLLQLSSLCNAKFIFKGRSCPIEGSVRYRSTVSEDLALKGLSEFRRELCITANAFMDHMHLMLLLEKLNPDPKPRLISGCIIWLSGIEI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02839 530 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 234 479 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02839 530 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 226 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02839 530 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 228 480 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02839 530 Coils Coil 155 179 - -
Aip04g02839 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 222 IPR027417 -
Aip04g02839 530 Pfam AAA ATPase domain 59 217 IPR041664 -
Aip04g02839 530 Gene3D - 60 256 IPR027417 -
Aip04g02839 530 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02839 Aip-Chr4 119535639 119538966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02839 4 480 Core DNA Replication Machinery Family AT4G29910 53.131 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02839 K02607 - gmx:100782175 652.899