Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02821 ATGGAGGAAGAGAAGGTTATTCAAAAACAACTATCTGATTCAATACCTCATCAACAGTTTTCAGCATCAACAACAGCAGTTCCAGATCTGCAAAGGGAGCTTCAGATTCAAGAAACGACCTCCCTGAATGCTGGATCGCGACCTCTGAACGCCAGCGATCGTACGTGGTGGGAAACAGCACCCGTTGCGGAGGACAACGACGTCCACATCGACAGAACCGCTCGGAGCAGCGGTGGCAGGCTAAGCATGGCCAGCAGTGGCGCCGAGGACGGCGCCGTCTCGAAGGGGAAGGTGGATGATACAGATCTATTGGATCGGGAACCGACACCAAAGCCGCCTTGCAGGTTTACGGACGCTGTGGTCAGAGGCGGAGCAGCTGCAAGAAAGCCCGCACCAGAACCAAGACCGCGGAAGATGAACGACGCGGTGGTAGCAAGCGGCGCCTCCGCGAAGGGAAAGCTCGTGAAGGTTATAAGGATGAGTGATTTTGGTGATGCCAAAAACATCTTTTACTTTAGGGAAGTTGATGATGCTGATAAACTATATGAAGCAATTAAAGCAAAGAAGAATGGCAAAGCTGTGGTTGTTGGAGGTGGATACATTAGTATAGAGCTGAGTACAAGATTGAACGACAACGATCTTGATGTTACTATGATCTACCCAGAACCTTGGTATGATTGGTTGGCAAAGAGGAACCTTCGGTCTGGATACTTCGTGTGGGCAATGAGTGCTTACGGTTTAGGTATGCTATTTCTATGTTTGATTCTTGGTATGACTTTAGTTGGTAGGATGTGTCAAAGGGCACATTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAATCTTTTATGGACAAGAGGGAAACCAGAAATGCCTTGCCCTCATAACCAAGAGTCTCAACAATGAACGAAGTGATAATAGCAATACTTCTCCAGATACCTTTTACTCTTCTAACATGGGTTATGTGGAGCCTATCCCTGTATACTTTCCTGATTACACAGATGCTGATCTTTGCAAAATATTGTCGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGATGTAGCTTTAAGGTCTTTCTTTAGGGTTACTAGGCAGGTTGATGAATTGTCCACTGCCTTCAAACCACTATACGAAAAATATTGTGAACCTTTAAGCGATAAAAGAGTCTTTCCTAATGGAGACAAAGACAAAGACATGAAGAGAAAGAGATGGTATGAGATAAGAAGTAAGAAGATTTAA 1248 0.4511 MEEEKVIQKQLSDSIPHQQFSASTTAVPDLQRELQIQETTSLNAGSRPLNASDRTWWETAPVAEDNDVHIDRTARSSGGRLSMASSGAEDGAVSKGKVDDTDLLDREPTPKPPCRFTDAVVRGGAAARKPAPEPRPRKMNDAVVASGASAKGKLVKVIRMSDFGDAKNIFYFREVDDADKLYEAIKAKKNGKAVVVGGGYISIELSTRLNDNDLDVTMIYPEPWYDWLAKRNLRSGYFVWAMSAYGLGMLFLCLILGMTLVGRMCQRAHFCHWERREVNSIFYGQEGNQKCLALITKSLNNERSDNSNTSPDTFYSSNMGYVEPIPVYFPDYTDADLCKILSRNQADSKLYSSFLDVALRSFFRVTRQVDELSTAFKPLYEKYCEPLSDKRVFPNGDKDKDMKRKRWYEIRSKKI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02821 415 MobiDBLite consensus disorder prediction 93 112 - -
Aip04g02821 415 MobiDBLite consensus disorder prediction 38 53 - -
Aip04g02821 415 PANTHER APOPTOSIS-INDUCING FACTOR 1 141 224 - -
Aip04g02821 415 PANTHER MONODEHYDROASCORBATE REDUCTASE 1, PEROXISOMAL 141 224 - -
Aip04g02821 415 MobiDBLite consensus disorder prediction 1 26 - -
Aip04g02821 415 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 327 397 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02821 415 MobiDBLite consensus disorder prediction 11 26 - -
Aip04g02821 415 Gene3D - 144 232 IPR036188 -
Aip04g02821 415 SUPERFAMILY FAD/NAD(P)-binding domain 143 224 IPR036188 -
Aip04g02821 415 Pfam Pyridine nucleotide-disulphide oxidoreductase 140 223 IPR023753 GO:0016491
Aip04g02821 415 MobiDBLite consensus disorder prediction 38 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02821 Aip-Chr4 119388553 119394412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02821 307 411 Core DNA Replication Machinery Family AT4G29910 52.381 2.08e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02821 K02607 - aip:107623265 239.965