Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02811 ATGAATTCAGAGGAAGCTGCACAAATTCCCAGAAGAACTACAAGGTCTTTAGCTTCATCTTCTGCGTCGACTTCTAATAATGCATCTTCTGCAAAAGTAAATAGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGAGGAGACCCTATTAGCCTAGATGAATTGTTTTCTAATTTCCCCGGTAGAAATAGCCAGATTCTCGAGATTGTAAGTCTTTTGGGGCCATTGAACACTCCAATGCTTCCTTTGTTTGTGTATGGTGGTGCTTCCACTGGAAAAACCAGTATCATTCTTCAATTATTCCGGCATCTCAATAGGCCTCTTGTTTATTCTAGCTGCAGGACGTGTTATAATCAGCGTATCTTGTTTGAATCTATTCTAAATCAGTTGCATCTCCATAGAAAAAGTGCTGCCAATGGCTATTCAAACGCAAAGCGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTAGGGAAGCATTGACCGATGCCATAAACAATCTGAAGGAGAAGTCGGAGAAGTTGATATCAGGCAAGACAATGGCACAAGGGGGGATTGGAAACATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGAGAGTGGGATAAGAGCTCTACTTTATTACCCTTTCTGTTTAATGTCTATGATCTGCTAAAGCTTCCTGAGGTGGGTCTAATATTTATCAGCAATACTTCTCCAGATACCTTTTACTCCTCTAACATGGGTTATGTGGAGCCTATCCCTGTATACTTTCCTGATTACACAGATGCTGATATTCGCAAAATATTGTCGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGATATGGCTTTAAGGTCTTTCTTTAGGGTTACTAGGCAGGTTGATGAATTGTCCACTGCCTTCAAACCACTATATGAAAAATATTGTGAACCTTTAAGCGATAAAAGAGTCTTTCCTAATGGAGACAAAGACAAAGACATGAAGAGAAAGTTATTTAGTCATATCAATCCTCACATCACATCCTCTCTGAATGAGATATTTAAGGTTTCATCTCACCCTTCAGCTGAAGTTGAGAACTCCAAAGAGGCAAATCTGAAGGTGAATCAAAAGAAACTGGAGCGACGTGAAGAAATTGCCAAGCTAGACTTTCACATGTCTACTAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCTTCCCGAAATCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTGATAATCGAAAGCGAAAGAGGAAACCCTCTGAGAAGGTGCCTGAAAGAAAGGAAAGTTTAGAAGAGGAGTTACTAATGAAAGGACCTGGAAGTTTCCCACTGGAGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCGGTCGCAGAAGATTCGTCGGATGAGGACAAACAAAGCGGCGAGCTGATGTCTGATGTTCTGTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTTAAAGGAAGAAGCTGTCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTATATCGGAAGACTTGGCTTTGAAGGTAACCTCAGTTCCCACGTAA 1581 0.4029 MNSEEAAQIPRRTTRSLASSSASTSNNASSAKVNSLEPLTINDLLVGGDPISLDELFSNFPGRNSQILEIVSLLGPLNTPMLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLHLHRKSAANGYSNAKRCERPSDFINFLREALTDAINNLKEKSEKLISGKTMAQGGIGNMIYLVFDNFQLVREWDKSSTLLPFLFNVYDLLKLPEVGLIFISNTSPDTFYSSNMGYVEPIPVYFPDYTDADIRKILSRNQADSKLYSSFLDMALRSFFRVTRQVDELSTAFKPLYEKYCEPLSDKRVFPNGDKDKDMKRKLFSHINPHITSSLNEIFKVSSHPSAEVENSKEANLKVNQKKLERREEIAKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVPERKESLEEELLMKGPGSFPLERLLAIFQCIVSVAEDSSDEDKQSGELMSDVLLQLSSLCNAKFIFKGRSCPIEGSVRYRSTISEDLALKVTSVPT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02811 526 Gene3D - 60 242 IPR027417 -
Aip04g02811 526 MobiDBLite consensus disorder prediction 409 439 - -
Aip04g02811 526 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 521 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02811 526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 297 IPR027417 -
Aip04g02811 526 Pfam AAA ATPase domain 59 216 IPR041664 -
Aip04g02811 526 Coils Coil 155 175 - -
Aip04g02811 526 MobiDBLite consensus disorder prediction 414 439 - -
Aip04g02811 526 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 252 521 IPR020796 GO:0000808|GO:0005634|GO:0006260
Aip04g02811 526 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02811 Aip-Chr4 119267306 119269979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02811 4 521 Core DNA Replication Machinery Family AT4G29910 57.089 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02811 K02607 - gmx:100782175 773.467