Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02791 ATGTCTACGTATGTTGAAATTCCTATCTTAGACATATCACAACCTTTGCAACCTTCTTCACTGTCCTCTCTCACCAAAGCAGCCAAAGAGTGGGGATTCTTCCACATCATCAACCATGGAATCTCCAAAGATCTTTGCATCCAACTCCAATCACTATCCAAACAATTCTTCAGCCTCCCTTATGATACAAAACTCAAGCTTGGCCCTTTTTCATCTCTTAAATCTTACACTCCCCATTTCATTGCATCTCCTTTCTTTGAGAGCCTCAGAGTTAATGGACCTAACTTCTATGTTTCAGCTAAGAGTTCTTCAGATCTACTCTTTGATAAACAAGATTCCAAATTAAGTGAGATGCTGCAAGAATATGGTAATAAGATGGAAGAATTGTCAAAGAAAATCCTAAGGGCAGTGTTGATGAGTTTAGGGGAAGGAATTGAGAAGAAGTTTCTTGAATCTGAATTCAGCAAGTGCCATGGTTACTTCAGAATAAACAATTATTCATCATCACAAGTAGAAAATAATAATATTATTATCGAAAAAGAAGAAGAAGAAAATGATGATGAAGAATTATTAGTTGAGGGTCTTGGAATGCACACTGATATGAGTTGCATAACAATCCTATACCAAGATGAAATTGGAGGGCTTCAAGTGAGATCGAAAAATGATAATAATAATAATAATAACGAAGGAGGAGGAAGAGAAAAATGGATAGACATAAAATCCTCAGAAGGAACCCTAGTTGTGAACATTGGAGACATGTTACAAGCTTGGAGCAATGATAAATTAAGATCTTCAGAGCATAGAGTTGTTTTGAGGAAGCCATCAATAGTGAAGAAGAATAATAGTAGGTTTTCATTGGCATTTTTTTGGTGCTTTGAGGATGAAAAGATTATTTTGGCTCCTGACGAAGTTGTTGGTGAAGGGAACAAGAGATTTTACAAGCCATTTTTGTGCTTGGATTATTTGAAGTTTAGAGAGAATAATGTGAGAGGAAAATTTGAAAAGGTTGGTTATACAGTCAAAGATTTTGCTGGGATTAAAGCACAGCTTTGA 1053 0.358 MSTYVEIPILDISQPLQPSSLSSLTKAAKEWGFFHIINHGISKDLCIQLQSLSKQFFSLPYDTKLKLGPFSSLKSYTPHFIASPFFESLRVNGPNFYVSAKSSSDLLFDKQDSKLSEMLQEYGNKMEELSKKILRAVLMSLGEGIEKKFLESEFSKCHGYFRINNYSSSQVENNNIIIEKEEEENDDEELLVEGLGMHTDMSCITILYQDEIGGLQVRSKNDNNNNNNEGGGREKWIDIKSSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLRKPSIVKKNNSRFSLAFFWCFEDEKIILAPDEVVGEGNKRFYKPFLCLDYLKFRENNVRGKFEKVGYTVKDFAGIKAQL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02791 350 Gene3D - 1 324 IPR027443 -
Aip04g02791 350 SUPERFAMILY Clavaminate synthase-like 4 330 - -
Aip04g02791 350 Pfam 2OG-Fe(II) oxygenase superfamily 182 289 IPR044861 -
Aip04g02791 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 72 IPR026992 -
Aip04g02791 350 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3 343 - -
Aip04g02791 350 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 343 - -
Aip04g02791 350 PRINTS Isopenicillin N synthase signature 24 41 - -
Aip04g02791 350 PRINTS Isopenicillin N synthase signature 198 219 - -
Aip04g02791 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 293 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02791 Aip-Chr4 118907731 118909714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02791 5 314 Glycosyltransferase AT5G59530 25.077 2.39e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02791 - - aip:107638064 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02791 04 118907731 118909714 Aip04g02791 04 118907731 118909714 ECH
Aip09g00276 09 2553928 2556812 Aip04g02791 04 118907731 118909714 ECH
Aip03g03170 03 102347604 102354138 Aip04g02791 04 118907731 118909714 ECH
Aip04g02791 04 118907731 118909714 Aip02g00068 02 1323424 1325034 PCT