Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02777 ATGGTTCATTGCAAATCAAGAGATAATGATATTGGAGAGCAATATCTGAAGCCTCATCAGTGTTTTGAGTTTCACTTTAAAACTAATGTTTGGGGCTCCACACTTTTCTTTTGTGGCTTTAATTGGCAAGGTGGTCGCCATTGGCGTCAACAAGCTACTTCTTCTCTCCGCCGCCGCCGCTTGCATCGCACGAGCTCCTTCGGCGCCGCTCGCATCACACCAGGTGCCGCTCGCATTGCACGAGCCCCTCCGGCGCCTCTCGCATCGCGTTGCTCCCTTCGTCACCATCGTCGCAGAGCCCTCTCCACCACTTTCGTCGCGCGTCTGCTCCCTTCATCGCCGTCGTCGCAGTGCTCTCTCCGCCAGATAGTTTCAAGAAAAACCACTCCGATCTACTTTAACTCGAAGACCGTCTCAAGAGCAGCTACGGCTACGTTCCAGctccagattttgaggatgaagaggatgggaaagaataagaagaagaagaagaagaagaagaaggagAGATTTTAG 516 0.4632 MVHCKSRDNDIGEQYLKPHQCFEFHFKTNVWGSTLFFCGFNWQGGRHWRQQATSSLRRRRLHRTSSFGAARITPGAARIARAPPAPLASRCSLRHHRRRALSTTFVARLLPSSPSSQCSLRQIVSRKTTPIYFNSKTVSRAATATFQLQILRMKRMGKNKKKKKKKKKERF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02777 171 Pfam Plant self-incompatibility protein S1 2 51 IPR010264 -
Aip04g02777 171 PANTHER - 2 50 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02777 Aip-Chr4 118169273 118173144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02777 3 48 Carbohydrate Esterase AT3G16970 43.478 1.42e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02777 - - adu:107485685 78.9517