Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02772 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGCGAAGATGATGATGAAGAAATAGAGATGGATGTGAAAGAAGAGGATGATGAGGATGGAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGAGATGGTAGGGATTGATGGTGGGAATGGTTTAGTTACTGCTGGTGGTGACAACAGTTTTCAACAGCAACAGCAGTTTCAAGAACAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAACGGACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACCGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTTATTGCTGCTTTAGCAAGAGAAGCTGGGTGGGTGGTTCTTCCTGATGGCACTACTTTTCCTCCAAGATCCCAGGGTCAAAGGCCAACTGGTGGTAATTCTGCAGTTGTCACTCCATCTTCTCCAGTGCCTTCACAACCAACTCCATCTGCTTCCATCAGGGGAGTTGCTTCTGGCTATAGGAGCTCATTAGAGTATAATACATGTCAAACAAAAGGTGTTTTCATGCCAACTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCCATGGTGGGGGATGGAGAGTTACAGAGAGACAATCAACCTTTGGTTGGCAGTGGTTCAATGGATACTGTTCATGAGAAGCAGATTATTGACTTGCCCTGCAGATTATCAGAGCGTGATCTGGCCGGTACTCCATATGTTCCAGTGTATGTGATGCTACCGTTAGGAGTGATCAATATAAAGTGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAAAGTATTGAAATCAATAAACGTTGATGGTGTTACAGTTAATTGTTGGTGGGGAATAGTAGAAGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAGATGGTGCATGAGCTGAAGCTTAAGCTGCAGGTTGTGATGTCGTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGCATTCCTTTGCCCCATTGGGTTGCAGAAATTGGTAGGACCAATCCTGATATCTTCTTCACTGACAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAGTAGATAAGGAACGGGTATTAAGAGGTCGGACTGCTTTAGAGGTCTATTTTGATTTCATGAGAAGTTTCCGGGTAGAATTTGATGAGTATTTTGAGGATAGTTTCATCTCTATGATTGAAGTTGGACTTGGTCCGTGCGGAGAGCTAAGATATCCATCTTGTCCTGTAAAACATGGTTGGAGATATCCTGGTGTTGGTGAGTTCCAGTGCTATGATCAATACATGTTGAAAAGTCTCAAGAAAGCAGCTGAAGCACGGGGACACTCTATTTGGGATAGGGGACCAGATAATGCGGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTCCTTAATTGGTATTCTAAGGTTTTAGTTGATCATGGAAACGGGGTACTTTCTCTGGCAAAATTAGCTTTCGAGGGATCCTGCATTGCTGCAAAGTTGGCAAATATTTACTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGTAATCGCGATGGCTATGTGGCTATTATGGAAATGTTAAAGAGCAATGGAGTTAGCTTGAACATTGCTTGTGCCGACTTAAACACATTGAACCAGCTTGAGGTCTTTCCAAAGGCATTCGCTGACCCTGAGGGATTAGTCTGGCAAGTATTGAATGCAGGTTGGGATCTTGGCTTACCAGTTGCCGGTGAGAATGCACTTCCTTGCCTAAACAGAGTTACCTATAACAAGGCTTTGGATAGTGCCAAACCCATGAATGATCCAGATGGAAGGCACTTTTCTTCCTTCACTTACCTAAGGCTTAGTCCATTACTTATGGAACAGCAAAACCTACGAGAGTTTGAACGATTTGTCAAGAGGATGCATGGGGAAGCTGTTCTTGATCTTCAGGTTCATTGGCTGAGCTCAATGGCCAAGGAAGAACAAGTGTTTGAGTTCCTCGGGTGTGTTCCTCTGCTACAGAGACTTCCTAGCTCCTCCGTCAGGAAGATTTCTCAGCTTGTGATTGTTAAGCACTATGAGCCTGGAGAGTATGTTGTTCGTGAGGGGGAACCTGCAGATGGGCTTTACTTCATATTTGAAGGAGAGGCTGAAGTTATTGGATCGGATAGAACTGATGATGAAAATCATCCAGAATTTCTATTAAAAAGATATGACTATTTTGGTTATGGTCTAGCAAATGCTGTTCATCAAGCTGATGTCATAGCTCTGACTAAGTTGTCATGTTTATTGCTGCTTCATGAGCACTCAGCACTGCTACAGCCAAATTCTATTTGGAGTGAAGAAAAACCTGTTGATACATGCTCGCTAGTGGAGCATATATTGCATTTGGAGCCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAAAGGCTCCAAAATTCGGGAAGGTGTTTGGTGGACAGACAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTTGGGGATTTTAACATGCCAATTATATATCAAGTTCATAGACTCCGTGAAGGGAAGAGCTTTGCCACGAGGAGAGTGGATGCAATTCAAAAGGGAAATATCATTTTCACTTTGATGGCTTCATTTCAAAAAGAAGAAATTGGGTTTGAACACCAGGAAGTGACTATGCCATCTGTCCCTAATCCAGATGAGGCAAGTACCAAGCTTACACTTCTTTCAATGGAAGAGTTACGGGAACAACGTCTTACTGACCCTCGTCTCCCAAGAACTTACCGTAACAAGGTTGCTACATCCGAGTTCATTCCCTGGCCCATAGAGATAAGGTTCTGTGAGCCTAAAACTAAAACAACTCAGACCAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCTGATCTGATATTTCTTCAAGTTAGCTTAAACCCTCATCGTCGAAAGGGCTTCAAGGCCCGGGCTGTTAGCCTAGACCACTCGATGTGGTTTCATCGCCCTCTAAGAGCTGATGACTGGGTTCTATTTGTGGTTAGTGTCATAAGTGTTCCATTGTTATTATCTTTTTCCTCTAGTGATTAA 3339 0.437 MATDMQRLIGTSEDDDEEIEMDVKEEDDEDGDEEENGGDHGNASEMVGIDGGNGLVTAGGDNSFQQQQQFQEQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPPRSQGQRPTGGNSAVVTPSSPVPSQPTPSASIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQTSMVGDGELQRDNQPLVGSGSMDTVHEKQIIDLPCRLSERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSINVDGVTVNCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRTNPDIFFTDREGRHNPECLSWGVDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDSFISMIEVGLGPCGELRYPSCPVKHGWRYPGVGEFQCYDQYMLKSLKKAAEARGHSIWDRGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSKVLVDHGNGVLSLAKLAFEGSCIAAKLANIYWWYKTASHAAELTAGYYNPCNRDGYVAIMEMLKSNGVSLNIACADLNTLNQLEVFPKAFADPEGLVWQVLNAGWDLGLPVAGENALPCLNRVTYNKALDSAKPMNDPDGRHFSSFTYLRLSPLLMEQQNLREFERFVKRMHGEAVLDLQVHWLSSMAKEEQVFEFLGCVPLLQRLPSSSVRKISQLVIVKHYEPGEYVVREGEPADGLYFIFEGEAEVIGSDRTDDENHPEFLLKRYDYFGYGLANAVHQADVIALTKLSCLLLLHEHSALLQPNSIWSEEKPVDTCSLVEHILHLEPIEVDIFRGITPPKAPKFGKVFGGQTVGQALAAASKSVDCLKVVHSLHAYFLLVGDFNMPIIYQVHRLREGKSFATRRVDAIQKGNIIFTLMASFQKEEIGFEHQEVTMPSVPNPDEASTKLTLLSMEELREQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKTKTTQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRRKGFKARAVSLDHSMWFHRPLRADDWVLFVVSVISVPLLLSFSSSD 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02772 1112 MobiDBLite consensus disorder prediction 145 181 - -
Aip04g02772 1112 Gene3D Glycosidases 256 720 - -
Aip04g02772 1112 CDD CAP_ED 724 808 IPR000595 -
Aip04g02772 1112 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 751 767 IPR018488 -
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 436 458 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 618 640 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 343 364 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 601 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 560 571 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 509 528 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 300 314 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 321 339 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 559 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 PANTHER BETA-AMYLASE 78 703 - -
Aip04g02772 1112 Pfam Glycosyl hydrolase family 14 269 689 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 SMART cnmp_10 724 843 IPR000595 -
Aip04g02772 1112 Gene3D - 838 1102 IPR042171 -
Aip04g02772 1112 Pfam Thioesterase-like superfamily 862 1098 - -
Aip04g02772 1112 Pfam Cyclic nucleotide-binding domain 743 817 IPR000595 -
Aip04g02772 1112 MobiDBLite consensus disorder prediction 1 96 - -
Aip04g02772 1112 MobiDBLite consensus disorder prediction 206 230 - -
Aip04g02772 1112 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 957 1099 IPR029069 -
Aip04g02772 1112 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 843 949 IPR029069 -
Aip04g02772 1112 MobiDBLite consensus disorder prediction 11 36 - -
Aip04g02772 1112 CDD Thioesterase_II_repeat2 855 947 - -
Aip04g02772 1112 SUPERFAMILY cAMP-binding domain-like 714 817 IPR018490 -
Aip04g02772 1112 MobiDBLite consensus disorder prediction 58 76 - -
Aip04g02772 1112 SUPERFAMILY (Trans)glycosidases 262 700 IPR017853 -
Aip04g02772 1112 ProSiteProfiles cAMP/cGMP binding motif profile. 724 794 IPR000595 -
Aip04g02772 1112 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 216 IPR008540 -
Aip04g02772 1112 Gene3D Jelly Rolls 722 824 IPR014710 -
Aip04g02772 1112 CDD Thioesterase_II_repeat1 1028 1101 - -
Aip04g02772 1112 PANTHER - 78 703 IPR001554 GO:0000272|GO:0016161
Aip04g02772 1112 MobiDBLite consensus disorder prediction 147 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02772 Aip-Chr4 118000442 118014296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02772 1 700 Glycoside Hydrolase AT2G45880 65.057 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aip04g02772 Glyco_hydro_14 2e-101 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02772 K01177 - gmx:100805560 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02772 04 118000442 118014296 Aip04g02772 04 118000442 118014296 ECH