Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02760 ATGGGGATTCAGTTCTCCAGCCTCGTGCCGTGCTGCGTAAATTCACAAGTTAAGGCATCTGTTATTGAAGTTCCGCATACTGGAAATGAAGATAGAAGTGAAGCCGATAATGGGCCTGCATTTTGTGAATTTACATTTGAGCAACTTAAGAATGCGACATCCGGTTTCTCTGTTCAGAATATAGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTGTATAAAGGGAAGTTGGAGAATCAAATGAGGATTGCTGTTAAGAGGTTCAATAGGAATGCTTGGCCCGATTCTCGGCAGTTTTTGGAGGAAGCTAGATCTGTTGGCCAGCTTCGTCACCAAAGATTGGCGAATTTGCTTGGTTGTTGTTGTGAAGGCGAAGAGAGGTTGCTTGTGGCCGAATACATGCCCAACGAAACACTCGCGAAACACCTTTTCCATTGGGAAACTCAACCGATGAAATGGCCAATGCGACTGAGAGTTGTTCTACATCTTGCAGAAGCTCTGGAATACTGCACGAGCAAAGGACGTGCGCTCTATCATGACCTTAATGCATATAGAGTTCTATTTGACGAGGATGGTAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTAGCATTTACCCCTCCTGAGTATCTCAGAACTGGTAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGAACTCTTTTGCTTGACATTCTCAGTGGGAAGCATATCCCTCCAAGTCATGCTCTTGATTTGATTCGAGACAGAAATCTTCAGATGCTGACGGATTCTTGCTTGGAAGGACAGTTTTCTGATGATGATGGAACCGAGTTGGTGCGCTGGGCATCTCGATGTTTACAGTACGAACCAAGAGAGAGGCCTAATCCGAAGTCATTAGTGGCTGCTTTGGCCCCTCTTCAGAAAGAGACAGAGGTTCCTTCACATGAATTGATGGGTATCCCGCATGGTTCCACTTTAGCTTCATTGTCTCCGCTTGGTGAAGCTTGTTCAAGAAAGGACCTGACTGCCATTCATGAAGTTTTGGAAAAACTTGGCTATAAAGATGATGAGGGAATTGCAAATGAGTTATCTTTCCAGATGTGGACTGATCAAATGCAGGACATGCTAAATTGTAAGAAAAAAGGAGATGCGGCTTTCCGGCAGAAAGATTTTAGACTTGCAATTGAGTTCTATACACAGTTCATTGATGCTGGAACAATGGTTTCTCCGACGGTACATGCGCGCCGCAGTTTATGTTATCTTATGAGCGAAATGCCGCAGGAAGCGCTAGGCGATGCAATGCAAGCGCAAGTGATTTCCCCTTTGTGGCACATTGCATCTTATCTTCAGTATGTTTCATTGGGTGGACTTGGAATGGAGCATGAAGCACAAGTAGCACTCAAAGAGGGAACAACATTGGAAGCCAAAAGGAGTGGACAAAAATAA 1467 0.4383 MGIQFSSLVPCCVNSQVKASVIEVPHTGNEDRSEADNGPAFCEFTFEQLKNATSGFSVQNIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRHQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWPMRLRVVLHLAEALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDILSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRWASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHELMGIPHGSTLASLSPLGEACSRKDLTAIHEVLEKLGYKDDEGIANELSFQMWTDQMQDMLNCKKKGDAAFRQKDFRLAIEFYTQFIDAGTMVSPTVHARRSLCYLMSEMPQEALGDAMQAQVISPLWHIASYLQYVSLGGLGMEHEAQVALKEGTTLEAKRSGQK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02760 488 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Aip04g02760 488 SUPERFAMILY TPR-like 381 480 IPR011990 GO:0005515
Aip04g02760 488 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 485 IPR045845 GO:0004672|GO:0009742
Aip04g02760 488 PANTHER LRR RECEPTOR-LIKE KINASE 1 485 - -
Aip04g02760 488 Gene3D Tetratricopeptide repeat domain 380 488 IPR011990 GO:0005515
Aip04g02760 488 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02760 488 SUPERFAMILY Protein kinase-like (PK-like) 39 318 IPR011009 -
Aip04g02760 488 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Aip04g02760 488 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02760 Aip-Chr4 117874711 117879570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02760 10 313 Glycoside Hydrolase AT3G07070 33.133 2.89e-43 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aip04g02760 PK_Tyr_Ser-Thr 5.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02760 K14500 - gmx:100781311 875.93