Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02756 | ATGGGGAGGAGACCTGCTAGGTGTTATCGACAAATTAAAAACAAGCCATACCCCAAGTCACGGTTTTGCCGTGGTGTTCCTGATCCCAAGATCAGGATTTACGATGTGGGTATGAAGAAGAAGGGTGTGGATGAGTTCCCTTTCTGTGTCCACCTTGTTAGTTGGGAGAAGGAAAATGTCTCAAGTGAGGCACTGGAAGCTGCTAGGATTGCCTGCAACAAGTATATGGCAAAGTTTGCCGGAAAGGATGCTTTCCACTTGAGAGTCAGGGTTCATCCATTCCATGTTCTTAGGATCAACAAGATGCTTTCATGTGCTGGAGCCGATAGGCTTCAAACTGGAATGAGAGGTGCATTTGGAAAGCCACAGGGCACATGTGCTAGGGTGGCCATTGGGCAGGTCCTTCTTTCTGTTCGCTGCAAGGACAGCAACAGCCATCATGCACAGGAGGCTCTCCGTCGTGCTAAGTTCAAGGGATTCACCAAGTTTAGCCGAGCTGATTATCTGAAATTCAAGTCAGAGAATAGGATTATGCCCGATGGTGTAAATGCACAGCTCCTTGGGTGCCATGGACCATTGGCTAATCGTCAACCTGGAAGAGCATTTTTGCCGCCCAGTGCAACCGCTTAG | 630 | 0.4873 | MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKGFTKFSRADYLKFKSENRIMPDGVNAQLLGCHGPLANRQPGRAFLPPSATA | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02756 | 209 | PANTHER | 60S RIBOSOMAL PROTEIN L10-LIKE | 1 | 203 | - | - | |
Aip04g02756 | 209 | ProSitePatterns | Ribosomal protein L10e signature. | 108 | 129 | IPR018255 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | Gene3D | Ribosomal protein L10e/L16 | 1 | 163 | IPR036920 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | Pfam | Ribosomal protein L16p/L10e | 12 | 158 | IPR016180 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | PANTHER | 60S RIBOSOMAL PROTEIN L10 | 1 | 203 | IPR001197 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | CDD | Ribosomal_L16_L10e | 41 | 163 | IPR016180 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | TIGRFAM | uL16_euk_arch: ribosomal protein uL16 | 1 | 158 | IPR001197 | GO:0003735|GO:0005840|GO:0006412 | |
Aip04g02756 | 209 | Gene3D | - | 164 | 201 | - | - | |
Aip04g02756 | 209 | SUPERFAMILY | Ribosomal protein L16p/L10e | 4 | 158 | IPR036920 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02756 | Aip-Chr4 | 117726221 | 117728105 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02756 | 1 | 209 | Cytoplasmic Ribosomal Protein Gene Family | AT1G66580 | 80.631 | 2.46e-129 | 361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02756 | K02866 | - | gmx:100305619 | 408.683 |