Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02732 ATGGATGTGGCTTGTAGCATACCACAGTCAAGAATGTTTCATGGGGTTGTAGGACCGTGTTACAGGCACAGGTCAGTAGGTCATTTTGAGTTCAGGGGATGTGCATTTATTGGAAACACAAGGAGTGTTTTGAGATTGCGTTTCAGTGGGATGAACAAAACTAGTGATGTTTCTGATTGTTGGAGTAAATTAAGAGTGGTGCCTGTTCGTGAACTTAATGTTTTGAATATGAGTAGTAGCTTGTATTGTAAGAATCTTTTTACTGGTTCTAGAGTAGTTTGGTCAAAATGCCAGGGTAGTGATTCTGTGGCATATGTTGATGGGAATGGGAGGAATGTTGATTATGTGGAAGGATCAGGGGAGGATGCTGGGCTGGGTGTTTCCAGTGCTGAACTGGATGCCCCTTTGGAAGAAAGGGAGAGTGAAATAGGAGTAGAGGAACAAAGCGTGGATGAGCTGAAGGAAATATTACAGAAGGCCTTGAAAGAGCTAGAAGTTGCACGTGTAAATAGTACCATGTTTGAGGAAAAGGTGAAAAAGATATCCGAGACTGCGATTTTCTTGCATGATGAAGCGGCAACTGCTTGGAACAGTGTTAATTCTACCCTTGACATCATTCAAGAAATTTCCAATGAGGAACAAATCGCAAAGGAAGCAGTTCAGAATGCAACCATGGCTCTTTCATTGGCCGAGGCTAGGCTTCAGGTAGCCATAGAATCATTGGAGGCTGCAAAAGAAGAGCGTGATTCGGCACAAGGTTCTAATGAGAGCAATGATGAAAACGACATAATAGAAAAGGAGAAGGCACTTTTGGTTGCTCAAGAAGATATCAAGGAGTGCCAAACAAATTTAGCCAACTCCGAGGTGGAGCTTAAACGGTTGCAAAATAGAAAGGAGGAGTTGCAGACAGAAGTTAGCAAATTGCATGAAATTGCTGAAAAGGCACAGCTGGATGCAGTGAAAGCCGAGGAGGATGTCACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCCACACAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCAGATAAGTCTGTTTCTACTTCTAATACTGATACCATTGAAACTATACAGGTAAATCAAGATGTTGTGGCTGTTCCTGAAGAGGAGAAAGTAGTCCAAGGTTTCTCTGGTGATGTCAGTGTTGAAAGAGACGAAGGCTTGCCTATTGATGATGAATCTTTGCTTGGCACGTTATCTTCTGAAACAATATCTGATAAAACCAGCCAACTTCTGGAAGACATAACACAGTCTGACTATTTGAGTGATAACGAGAATGCAGTTCAAACTAAAAAACAAGAAATGCAGAAAGATTTGACTAGAGATAGTTCATCTCTTGCTCCCAAGGCATTACAAAAGAAATCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTTTACTGAAGAAGATGGAACCGAGTTCACACCAGCATCAGTTTTCCAGAGCCTTGTGTTATCTGCAAAGCAGCAGTTTCCCAAGCTGGTTCTTGGGTTGTTGTTTATGGGAGCAGGGGTTGCCTTCTATGCCAATAGAGGAGAAAGGACTGCTCAGCTGCTTCAACAGCCTGAAGTTATTGTGACCAGTGTTGAAGAAGCTTCCAGTAGTGCAAAGCCACTGGTTAAGCAACTTAAGAAACTCCCTAAGAAAATAAAGAAAATTATTGCATCGTTACCTCAGCAAGAGGTGAATGAAGAAGAAGCCTCCCTCTTTGATGTGCTATGGTTATTACTTGCAAGTGTTATATTTGTACCAATATTTCAAAAACTTCCCGGAGGCAGCCCTGTTCTTGGCTACTTGGCTGCTGGAATCTTAATTGGGCCTTATGGCCTCTCTATAATTCGACATGTTCATGGGACAAAGGCAATTGCTGAATTTGGTGTTGTTTTCCTTTTATTCAACATTGGCCTGGAGCTCTCTGTTGAAAGACTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGCAACTGCTGTAGTTGTTGGATTGGTGGCTCGTATTTGTGGCCAGGCTGGTCCTGCAGCTATCGTCATTGGGAATGGCCTCGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTCTCTGTTTTACTTTTTCAGGATTTGGCAGTCGTGGTCTTGCTGATACTCATTCCTCTTATTTCACCCAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGATTGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAAGTTGCAGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTCCTTGTTATTCTTGGGACCAGTCTTCTTACAGCCAGGGCAGGGCTTTCAATGGCATTGGGAGCATTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCGTTACAGGTTGAATCTGATATTGCTCCATACCGTGGCCTTCTTTTGGGGTTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTTATCACCAGCACACTGGGACTGTTAATATGTGGCAAGACTATCTTGGTTTCTGTCATTGGTAAAATCTTTGGGATTTCTATCATTTCTGCCATAAGAACTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCTGAGATGTCTTCTTTGCTCTTTCTTGTCGTGGGCCTGTCAATGGCCATTACACCTTGGTTGGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCACGATGTTCGAAGTTTATTACCTGTGGAAAGTGAGACAGATGATCTGCAAGATCATATCATCATTTGTGGGTTTGGGCGAGTTGGTCAGATCATTGCCCAACTTCTTTCTGAGAGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCAGTTGGACGTGCCCTGGATCTGCCAGTATACTTTGGTGATGCTGGTAGTCGAGAGGTCCTCCATAAAGTTGGGGCTGAAAGAGCATGTGCTGCAGCAATAACTCTAGATACACCTGGTGCAAATTATAGAACCGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTAGAGAAGGCTGGAGCTACTGCTGTTGTTCCAGAGACCTTAGAACCTAGTCTTCAACTAGCAGCTGCTGTCTTGGCTCAGGCCAAGCTTCCCACATCGGAGATTGCAGCAACCATAAATGAATTCAGATCCCGCCATCTGGCCGAGCTCACGGAGCTGTGCGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTCAATAGAATTATGAGCAAACCCAAATCTCAATCACCGGATTCACTTGATGATGCTCAAGTGTCTGAAGGGACATTGGCCGTATGA 3564 0.4346 MDVACSIPQSRMFHGVVGPCYRHRSVGHFEFRGCAFIGNTRSVLRLRFSGMNKTSDVSDCWSKLRVVPVRELNVLNMSSSLYCKNLFTGSRVVWSKCQGSDSVAYVDGNGRNVDYVEGSGEDAGLGVSSAELDAPLEERESEIGVEEQSVDELKEILQKALKELEVARVNSTMFEEKVKKISETAIFLHDEAATAWNSVNSTLDIIQEISNEEQIAKEAVQNATMALSLAEARLQVAIESLEAAKEERDSAQGSNESNDENDIIEKEKALLVAQEDIKECQTNLANSEVELKRLQNRKEELQTEVSKLHEIAEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSTSNTDTIETIQVNQDVVAVPEEEKVVQGFSGDVSVERDEGLPIDDESLLGTLSSETISDKTSQLLEDITQSDYLSDNENAVQTKKQEMQKDLTRDSSSLAPKALQKKSSRFFSASFFSFTEEDGTEFTPASVFQSLVLSAKQQFPKLVLGLLFMGAGVAFYANRGERTAQLLQQPEVIVTSVEEASSSAKPLVKQLKKLPKKIKKIIASLPQQEVNEEEASLFDVLWLLLASVIFVPIFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVARICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITSTLGLLICGKTILVSVIGKIFGISIISAIRTGLLLAPGGEFAFVAFGEAVNQGIMSSEMSSLLFLVVGLSMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNRIMSKPKSQSPDSLDDAQVSEGTLAV 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02732 1187 MobiDBLite consensus disorder prediction 1166 1187 - -
Aip04g02732 1187 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1187 - -
Aip04g02732 1187 Pfam TrkA-N domain 992 1105 IPR003148 GO:0006813
Aip04g02732 1187 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 988 1129 IPR036291 -
Aip04g02732 1187 Coils Coil 143 170 - -
Aip04g02732 1187 ProSiteProfiles RCK N-terminal domain profile. 991 1113 IPR003148 GO:0006813
Aip04g02732 1187 Gene3D - 580 967 IPR038770 -
Aip04g02732 1187 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1187 - -
Aip04g02732 1187 Coils Coil 270 325 - -
Aip04g02732 1187 Gene3D - 987 1151 - -
Aip04g02732 1187 Coils Coil 227 261 - -
Aip04g02732 1187 Pfam Sodium/hydrogen exchanger family 588 959 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip04g02732 1187 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 591 870 IPR004771 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02732 Aip-Chr4 117015362 117025899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02732 1 1187 Inorganic Solute Cotransporters AT4G00630 68.010 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02732 - - gmx:100818163 1805.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02732 04 117015362 117025899 Aip04g02732 04 117015362 117025899 ECH
Aip04g02732 04 117015362 117025899 Aip02g00040 02 1107957 1116226 PCT