Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02722 ATGAATAACTTAATGCTTCCATTGATTGCTATAGGTTTAGCTGGTTACATAGCACCTGAGCATGTCCTAACCAGAATCTTCACAGATAAATGTGATGTTTATTCATTTGGTATGGTCCTAATAGAAGTTGTATCCACTACTTACAAGCACACCATCTTTGACAAAATCATTATGTTGGAGAGCTCATCAGATTTGTCTCTAGATCCATTTGATTTAATGAATCCATTTGTGGATATATCTGAAATGTTGGAGAGATTCTCAGTTGATGAGATTATTGATCCAATTCTGATGAGAAAGATAGCACCAGAATGTTTGGCAGTATTCATAGATGTCACAAAAAGATGCTTGAGCAGAGAAGCAAATGAAAGACCAAATATAGGTGAAGTAGATCTTGAACTGGAGCTAGCACTAGCACTGCAAGAGGAGGCCGATGACCGGAATCATGGTGGTGGCTGGTGA 459 0.3834 MNNLMLPLIAIGLAGYIAPEHVLTRIFTDKCDVYSFGMVLIEVVSTTYKHTIFDKIIMLESSSDLSLDPFDLMNPFVDISEMLERFSVDEIIDPILMRKIAPECLAVFIDVTKRCLSREANERPNIGEVDLELELALALQEEADDRNHGGGW 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02722 152 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02722 152 Gene3D Transferase(Phosphotransferase) domain 1 8 149 - -
Aip04g02722 152 SUPERFAMILY Protein kinase-like (PK-like) 11 129 IPR011009 -
Aip04g02722 152 PANTHER OS07G0166700 PROTEIN 10 148 IPR045272 GO:0004714|GO:0006468
Aip04g02722 152 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 148 - -
Aip04g02722 152 Pfam Protein tyrosine and serine/threonine kinase 16 129 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02722 Aip-Chr4 116872290 116872748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02722 12 149 Receptor kinase-like Gene Family AT3G51550 32.609 9.38e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip04g02722 PK_Tyr_Ser-Thr 1.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02722 - - aip:107637072 286.96