LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip04g02709	ATGGCGACTCCAGAAGAGGCAAAGCTCGAAACTTTCCTTCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGCTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATATTTTCTGATAAAGATGTCTCTGATGGGGTCTTGTTGGTTGTTCCGCTTGACTTAGCAATTACTCCCATGAGGGTGTTGCAAGATCCTCTTCTAGGGCCAGCATGTAGATCCATGTTTGAAGAAGGACATGTGGATGACAGGTTACTAATGATGCTCTTGCTGACTGTGGAGCGATTGCGCAAGAATTCTCTTTGGAAACCGTACCTTGATATGCTCCCAACCACTTTTCACAATCCACTTTGGTTTAGCGATGACGAACTTCAAGCACTAAGAGGAACAACTTTATACCGTGCAACTGAGTTGCAGAAGAAAAGCCTGGTATCTTTATATGAAACTAAAGTGAAGGATTTGGTGAAGAAGCTTTTGACTCTTGACGGAGCTTCGGAGATTGAGGTGCGCTACGAAGATTTCCTTTGGGCCAATTCAGTATTCTGGAGCCGTGCTTTGAACATTCCGATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGCTCGTGAAAGTTGCATTCCAGAAGATGATGGAAAAGGGAGTCAGGTTAAACAATCCGAAAATCTAACGAAGGAAATGATGTGTACCACGACGCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCGATAGCAACATGGGAAGTTGATGGAACTGGTTCAACAACAGGGGCTCCTTGCTGCATGTACCTTCAATCTGCTTCTCCCAGTCCCTTGCAGATTGATCAAGAAATCTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTTCACTATCCAGCAGAAGCACTCAATACTATTTCTTTTTCGGAGTCCAAAAGCCAGCTGCTCGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCTAAAGCTTTGCTGGAACAAGGATTTTTTCCATTAGGCACCCAAAATAAAGGAGAAAACAACAATGGCAAGGTTGATCAAGTTTCCAACTATAGTTGGAGCGGTCAGCGTAAGACGCCATCGTATGTAAACAAGCTGGTTTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAACTTTACAAGGTTTCCTCAATGCTTGAAGAGCTTGTAGGACCTGAAGGGGAGCGAGAACTATCTGATACAGATGTGCAAGCAGCAATATGGGAGGTTTGTGGTGATTCAGGAGCTTTCCAAATTCTTGTTGATCTTCTTCGTGTGAAGTTGATGGATCTCGAAGAGGGTTCTGGAACAGAAGAAAGTGACCTTGATTTGCTCAAGAAGGCTCTTATTATTGATAGCCACGAAAATAACAAACATCCAAGCAAAATGGAAAATGAGTCAGAAGAACAAGAACACATTGTGATGAGTAGAAACAAATGGTCTTCAATTGTATATAGGCGTGGCCAAAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTCTTCAGTTATCACAAAATGAACAAGACTTTACTGTTCCTTAA	1671	0.4255	MATPEEAKLETFLQWLQANGVELRGCKIKYCDSRKGFGIFSDKDVSDGVLLVVPLDLAITPMRVLQDPLLGPACRSMFEEGHVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFHNPLWFSDDELQALRGTTLYRATELQKKSLVSLYETKVKDLVKKLLTLDGASEIEVRYEDFLWANSVFWSRALNIPMPRSYVFPEMQEARESCIPEDDGKGSQVKQSENLTKEMMCTTTQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGSTTGAPCCMYLQSASPSPLQIDQEISISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEALNTISFSESKSQLLEVQKAEMRCLLPKALLEQGFFPLGTQNKGENNNGKVDQVSNYSWSGQRKTPSYVNKLVFPEKFMTTLRTIAMQEDELYKVSSMLEELVGPEGERELSDTDVQAAIWEVCGDSGAFQILVDLLRVKLMDLEEGSGTEESDLDLLKKALIIDSHENNKHPSKMENESEEQEHIVMSRNKWSSIVYRRGQKQLTRLFLKEAEHALQLSQNEQDFTVP	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip04g02709	556	Pfam	SET domain	36	297	IPR001214	GO:0005515
	Aip04g02709	556	PANTHER	SET DOMAIN-CONTAINING PROTEIN	3	551	-	-
	Aip04g02709	556	ProSiteProfiles	SET domain profile.	26	297	IPR001214	GO:0005515
	Aip04g02709	556	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	3	551	-	-
	Aip04g02709	556	CDD	SET_LSMT	32	311	-	-
	Aip04g02709	556	Gene3D	set domain protein methyltransferase, domain 1	5	311	-	-
	Aip04g02709	556	SUPERFAMILY	SET domain	8	315	IPR046341	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Aip04g02709		SET	9.9e-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip04g02709	-		-	gmx:100777394	913.294