Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02698 ATGGCAGAAACTGAGGATAAGAAACATGCTCCTCCTCCACCACCACCAACAGCAACAACTGAAGACGCCACCGTCGCCGCCGCCACCACCACCAACACCAACATAGCTCAACAAGCAAACAATAAATCCAGCAACAACAACATGGTGAGAAGGTTCATAGGGGTGAGGCAAAGGCCCTCAGGGAGATGGGTGGCAGAGATTAAAGACTCATCTCAGCATGTAAGATTATGGCTCGGAAATAATAACAATAATAATAAGCATGGATTAAGCTTTGCCTCATTGAAAGCAAAGTTGAGCAAGAACTTGCAAAGCATCATGGCAAGGGCTAATCACAACAACAAATCTTCTTCATCAAAGAGTAGAGTGAGTGATCATTTCACCTTTGCTAGCATATTCAATCGCAATAGGAACAATAATCATCATCAACAACATGCTCCTCCTCCTCCTATGGTAATAGATGTTAAGAACATTGACAAAGTGGTGCAACCTAGCATCATAGTACCACCACACAAGGACCAACATCATCAACATTATTATGAGCCTAATAACAACAACAACAACAACAATTGGGAAACTTCAAGTGTCTCTGATTGTAGCAACGAGTGGATCATAAACAATAATGGGTTGTTCCAAAAACATAGGTTGTTGTTGGATTCATCATCATCAGTAGGTTCTGATAATGATGGTGAGTTTGGTTGTGTTGGTGATCAAGGGGTTTTGGATCAACTAATGGGGTGGGTTGATAGCACTCAGATTAGTAGTAGTGATGAGGGTTTATCATCATCAAGGAGCAAAAGATTCAAGGTAGCTTCTTCAGTTCTTGTGCCACCAACTTTCACTGCTTCTTCTTCTCCTTCTCCTTATTATTATTATGATTGCGCTTCTCCATACACTAGTGCTTCTGGATCTCCATATAATGGTAATGGAAGTTATTATGGTTATGGTTATGGCTCCCCTAATTACTATGCCTCTCACTATAATAATAGTAATGATGGCAAATAA 1002 0.4062 MAETEDKKHAPPPPPPTATTEDATVAAATTTNTNIAQQANNKSSNNNMVRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGNNNNNNKHGLSFASLKAKLSKNLQSIMARANHNNKSSSSKSRVSDHFTFASIFNRNRNNNHHQQHAPPPPMVIDVKNIDKVVQPSIIVPPHKDQHHQHYYEPNNNNNNNNWETSSVSDCSNEWIINNNGLFQKHRLLLDSSSSVGSDNDGEFGCVGDQGVLDQLMGWVDSTQISSSDEGLSSSRSKRFKVASSVLVPPTFTASSSPSPYYYYDCASPYTSASGSPYNGNGSYYGYGYGSPNYYASHYNNSNDGK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02698 333 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 79 - -
Aip04g02698 333 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 82 259 - -
Aip04g02698 333 SMART rav1_2 51 103 IPR001471 GO:0003700|GO:0006355
Aip04g02698 333 Gene3D AP2/ERF domain 50 86 IPR036955 GO:0003700|GO:0006355
Aip04g02698 333 ProSiteProfiles AP2/ERF domain profile. 51 112 IPR001471 GO:0003700|GO:0006355
Aip04g02698 333 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g02698 333 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 82 259 - -
Aip04g02698 333 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 79 - -
Aip04g02698 333 SUPERFAMILY DNA-binding domain 52 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02698 Aip-Chr4 116279489 116281731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02698 37 79 AP2-EREBP Transcription Factor Family AT5G19790 58.140 2.92e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02698 K09286 - gmx:100799444 194.126