Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02697 ATGGTGGAAGGTGGTGGAGGTGAGGTTTCGGTTTCGGATTCGGTTGATGAACTTTCAACAGAAGAATGGTTGTTGAATGCAGAGAAGCTTGTTCCTGAGGCAATTGATAAAGCTAAAGAGGTTAAAGTGTTCCTGGGAAGATGGAAGATGATTGTTTCGAAACTCGAACAGATCCCTTCGCGGCTGTCGGATTTGTCGAGCCACCCGTGTTTCGGGAAGAATGCGCTTTGCAAGGAGCAGTTACAGGCAGTTACAAGGACTCTGAAGGAATCAATTGAATTGGCTGAGATTTGTTTGAAGGACAAGTTTGAAGGTAAGTTGAAGATGCAAAGTGACCTTGATTCATTAGCCGCCAAATTGGATTTGAATTTGAGGGATTGTGGCCTCCTCATCAAGACTGGTGTCCTCGGCGAGGTGGCCCGGCCAGAGGCGGATGCTGCCACGCATGGCAGCATCAAAGAATTGCTTGCTCGCCTCCAGATCGGGCATCTGGAGGCAAAGCATAGAGCATTGGATAGTCTTGTGGAAGCAATGAGGGAAGATGAGAAGAAAGTTTTGGCGGTTATGGGGAGAAGCAACATTGCTGCTTTGGTTCAGTTACTAACCGCCACTTCTCACAGGATAAGAGAGACGGCGGTTACAGTTATATGCTCGCTCGCGGAATCCGGTAGCTGTGAGAATTGGTTAGTTTCCGAAGGCGTTCTGCCGCCTCTTATAAGGCTGGTTGAGTCCGGTAGTTTTGTGGGAAAAGAGAAAGCTGTAATTTCTCTTCAGAGGCTGTCAATGTCGGCGGAAACAGCCCGCGCAATCGTCGGACACGGCGGCGTTAGGCCGTTGGTTGAGCTTTGTCAGACCGGGGATTCGGTGTCGCAATCCGCGGCTGCTTGTACACTGAAGAATATTTCGGCCGTTCCGGAGGTTAGACAAGCTTTGGCCGAAGAAGGCGTCGTTAAAACAATAATCAATTTGCTTAACTGCGGAATTCTGTTGGGATCCAAAGAGTACGCGGCGGAGTGCTTGCAGAATCTAACTGCAAGCAACGAGAATCTTCGTAGGAATATAATAACAGAAGGTGGCGTTATGAGTCTTCTAGCGTATCTTGATGGTCCTTTGCCTCAAGAATCCGCCGTTGGCGCGTTGAGGAACTTGGTAGGATCTGTCCCAGAGGACACACTCGTTTCGCTCGGCTTCCTTCCAAGATTGTCTCACGTGCTGAAATCCGGTTCCCCGGGAGCTCAGCAGGCGGCCGCAGCCGCAATCTGCCGAGTTTCCAGCACACCGGAGATGAAAAAGCTAGTGGGCGAAGCCGGATGCATACCTCATCTGGTAAAGATGCTGGAGGCGAAATCAAGCAGCGGTAGGGAGGTGGCGGCGCAGGCGATGGCGAGCCTAATTAGCGTGTCGCGGAATCAGAGAGAAGTGAAGAAGGATGATAAGAGTGTTCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCGCAGAACAGTGCAAAGAAATATGCAGTTTCATGCTTGGGATCGCTTTCTTCATGCAAGAAATGCAGGAAGCTTATGATCTCTTATGGCGCAATTGGGTATCTGAAGAAACTCACTGAGATGGATATTCCAGGTGCTAAGAAACTTCTTGAGAGATTGGAGAAAGGCAATTTTAGAAGCTTGTTTAGCAAGAAATAG 1671 0.4919 MVEGGGGEVSVSDSVDELSTEEWLLNAEKLVPEAIDKAKEVKVFLGRWKMIVSKLEQIPSRLSDLSSHPCFGKNALCKEQLQAVTRTLKESIELAEICLKDKFEGKLKMQSDLDSLAAKLDLNLRDCGLLIKTGVLGEVARPEADAATHGSIKELLARLQIGHLEAKHRALDSLVEAMREDEKKVLAVMGRSNIAALVQLLTATSHRIRETAVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSFVGKEKAVISLQRLSMSAETARAIVGHGGVRPLVELCQTGDSVSQSAAACTLKNISAVPEVRQALAEEGVVKTIINLLNCGILLGSKEYAAECLQNLTASNENLRRNIITEGGVMSLLAYLDGPLPQESAVGALRNLVGSVPEDTLVSLGFLPRLSHVLKSGSPGAQQAAAAAICRVSSTPEMKKLVGEAGCIPHLVKMLEAKSSSGREVAAQAMASLISVSRNQREVKKDDKSVPNLVQLLDPSPQNSAKKYAVSCLGSLSSCKKCRKLMISYGAIGYLKKLTEMDIPGAKKLLERLEKGNFRSLFSKK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02697 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 556 - -
Aip04g02697 556 SMART arm_5 181 221 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 386 425 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 263 303 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 468 509 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 426 466 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 304 345 IPR000225 GO:0005515
Aip04g02697 556 SMART arm_5 346 385 IPR000225 GO:0005515
Aip04g02697 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 556 - -
Aip04g02697 556 Gene3D - 370 547 IPR011989 -
Aip04g02697 556 Gene3D - 143 369 IPR011989 -
Aip04g02697 556 SUPERFAMILY ARM repeat 152 515 IPR016024 -
Aip04g02697 556 Pfam Armadillo/beta-catenin-like repeat 267 303 IPR000225 GO:0005515
Aip04g02697 556 Pfam Armadillo/beta-catenin-like repeat 426 464 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02697 Aip-Chr4 116266865 116270462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02697 333 526 U-box Gene Family AT3G54790 30.303 3.22e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02697 - - gmx:100789140 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02697 04 116266865 116270462 Aip04g02697 04 116266865 116270462 ECH