Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02675 ATGAGGAGAGAGCTTGCAGCTGCGATGATAACCAACTTTACCCCTCTCACTCTATCTCCAATTCTCAATCCATTACCTCCTCACCCCCAACCCGAAACCCTAATCTCTTCCCTTACCTCCTTCGCATCCTCTTCTTTCCACAAGCTTGATTTACTCCACCAACTCACTAGACTCGTCAAGCACGACTCACTCTTTCGTGGCCATCACCGACTCAAAAATTGTCTTGCCGTGTTACTCTCCTGGGTTGAGTCCCACGACCACGATTCCCTTCGTACTCTTTCTTTGCTTCTCAATCTTAGCCTCGACGATCACAACAAGATTGGACTCGTTGCTAAGAGAGTCGTTACTCGTCTTGTTGTCATCGTCTCCGGGACCGCTGTTAAAAATCCATTCTCAGATTGTCGCGCCCTTGTAAGGAAGCTGCAACGACCGTTTATGCTCTCTGCTAGTTGTTGA 456 0.4825 MRRELAAAMITNFTPLTLSPILNPLPPHPQPETLISSLTSFASSSFHKLDLLHQLTRLVKHDSLFRGHHRLKNCLAVLLSWVESHDHDSLRTLSLLLNLSLDDHNKIGLVAKRVVTRLVVIVSGTAVKNPFSDCRALVRKLQRPFMLSASC 151
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02675 151 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 140 - -
Aip04g02675 151 PANTHER U BOX DOMAIN-CONTAINING 8 140 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip04g02675 Aip-Chr4 115729915 115730370 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02675 8 141 U-box Gene Family AT4G21350 37.410 6.36e-09 51.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02675 - - ahf:112743134 253.832