Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02629 ATGATGCCAGAGAAAGATGATGATGGCCAGTTTGCAAGAGGAGGATGGAATAGTGAGGATGGAAGGCTTAGCTGTGGGTATTCAAGCTTCAAAGAGGAAGAAAGTATCGATGAGGATTTTCACGATATTAAAACATTGAAAATTGGTGGTCATTCAGTATGCTTACTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATTTTTACTGATGCCAAATTGGCTATAA 279 0.3871 MMPEKDDDGQFARGGWNSEDGRLSCGYSSFKEEESIDEDFHDIKTLKIGGHSVCLLGIFDGHGGSRAAEYLKEHLFDNLMKHPKFLLMPNWL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02629 92 ProSitePatterns PPM-type phosphatase domain signature. 55 63 IPR000222 GO:0043169
Aip04g02629 92 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g02629 92 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 2 86 - -
Aip04g02629 92 Gene3D - 16 90 IPR036457 -
Aip04g02629 92 PANTHER ALPHABET, ISOFORM E-RELATED 2 86 - -
Aip04g02629 92 SUPERFAMILY PP2C-like 19 85 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02629 Aip-Chr4 114921825 114922103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02629 1 86 PP2C-type Phosphatase Gene Family AT5G53140 67.442 3.26e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02629 K17506 - gmx:100805795 154.836