Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02626 ATGATTTTACAGAGACATACTGGATCCTTTAATCTTCTCCGGAGGCTTCAACTGGTGCTGATACTGCTTAGCAGCGCTTCGGTGAATGGCGTCGAGAGAAAGGACTTTTACATTGTTTTCTTGGGAGCTCATCATACTTTGAATAGTGACATTATACTTGAGACACATTTAAATGTTCTAACTTCTGTGAAGGGAAGCTATCTTGAAGCCCAAGAATCCATGGTTTATAGCTACACAAATAGCTTCAATGCATTTGCTGCAAAACTATCAGAGAATGAAGCCAAGAAGTTATCTGAAATGGATGAAGTTTTGTTGGTATTTCGAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGTTTTCCAATAGCTTCCAAGAGAAGATTGCAATTTGAGAGTGACATTGTTGTTGGTGTTTTGGACACAGGGATCACTCCTGAGTCTCAAAGCTTCAAGGATGATGGATTAGGTCCTCCACCAGCAAAATGGAAAGGGAGTTGTGGCCCTTTTGCTAATTTCTCAGGATGCAATAACAAGATCATAGGAGCAAAATACTTCAAAGCGGATGGAACCTCTGATCCATCAGACATACTATCTCCCGTAGATGTTCTTGGCCATGGCACTCACACTGCATCAACAGCAGCAGGCACCCTGGTCCCAGAGGCAAGCCTCTTCGGCCTGGCTAACGGGACAGCCCGCGGCGCAGTCCCCTCGGCCCGGCTGGCCATTTACAAGGTCTGCTGGACATCCAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCCATACATGATGGTGTGGATATCATTTCAATTTCCATTGGTGGAGGTGATCCTAGCTATGTGGTTGATGTTATATCCATTGGCTCGTTTTTCGCCGTTAGTAAAGGGATACTCACAGTGGCCTCCGCTGGAAATGATGGCCCGGATATGGCCACCGTGACGAATACTGCACCGTGGATTGTTACAGTTGCAGCTAGTGGCATTGACAGGGCTTTTAGGAGCACTGTGATATTGGGGAGTGGAAAGAATGTTTCTGGAATAGGAGTGAGCAGTTTCAATCCAAAACAGAAACAATATCCTCTCATCAATGGCGGCGATGCTGCTCTGAACTCTGAAGCCAAGGAATATGCTAGATACTGCTTTGGAGGTTCCTTAGATCCAAATAAGGTGAAGGGAAAGCTTGTTTATTGCAAATTAGGAACATATGGCACTGAAGCAATTGTGAAAGAAATTGGGGGCATTGGTGCCATAATTGAAAGACAAAGATATCTTGATGTTGCTCAAGTTTTCATGGCTCCTGCTACCATTGTGAATATGAGCTTAGGTGATACTATCACTAGTTATATACATTCCACAAGATCACCATCAGCAGTGATATACAAGACCCATGAAATTAGAAAGCCAGCTCCATTTGCTGCTTCATTCTCATCTAGAGGTCCAAATCCAGGGTCTCAACATATTCTTAAGCCTGATATTGCAGCACCTGGCATTAACATCTTGGCATCTTATACACTTAGGAGGTCAATCACTGGGTTGAAAGGGGACACACAATTTTCAAAATTTAATCTATTGTCAGGAACTTCCATGGCTTGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAGATTGGACTCCTGCTGCAATTAGATCTGCCATTATTACCACAGCCAAACCAATGAGCAAGAAAATGAACAATGAAGCAGAATTTGCTTATGGTTCTGGCCAACTAAACCCGACAAGAGCTCTAACACCTGGTTTAATCTATGACATGGATCACTTTGGTTACATCCAATTCCTGTGCCATGAAGGTTACAGTGGTGCCACATTATCAGTGTTACTTGGTTCTCCTGTGAATTGCTCTTCTTATTTGCTTCCTGGTGCTATTGGCCATGATGCCATCAACTACCCCACCATGCAACTCATCTTGAAATCAAATAAAGACACGACAATTGGAGTTTTCAAAAGAACAGTGACAAATGTAGGTCTTGGTCCAACAATCTATAATGCCACTATCAAGTCACCAAAGGGAGTTGAAATTACAGTGAAACCAACCAGCCTCATGTTTTCTCATACCATGCAGAAGAAGAACTTCATATTAATGGTGAAAGCTAAATCTATGGCAAGTATGAAAATTATCTCTGGGTCCCTTATATGGAAAAACTCAGTTTACTATGTTAGAAGTCCTATTGTCATTTATAGTCCATAA 2244 0.426 MILQRHTGSFNLLRRLQLVLILLSSASVNGVERKDFYIVFLGAHHTLNSDIILETHLNVLTSVKGSYLEAQESMVYSYTNSFNAFAAKLSENEAKKLSEMDEVLLVFRNQYRKLHTTRSWNFIGFPIASKRRLQFESDIVVGVLDTGITPESQSFKDDGLGPPPAKWKGSCGPFANFSGCNNKIIGAKYFKADGTSDPSDILSPVDVLGHGTHTASTAAGTLVPEASLFGLANGTARGAVPSARLAIYKVCWTSSGCADMDILAAFDAAIHDGVDIISISIGGGDPSYVVDVISIGSFFAVSKGILTVASAGNDGPDMATVTNTAPWIVTVAASGIDRAFRSTVILGSGKNVSGIGVSSFNPKQKQYPLINGGDAALNSEAKEYARYCFGGSLDPNKVKGKLVYCKLGTYGTEAIVKEIGGIGAIIERQRYLDVAQVFMAPATIVNMSLGDTITSYIHSTRSPSAVIYKTHEIRKPAPFAASFSSRGPNPGSQHILKPDIAAPGINILASYTLRRSITGLKGDTQFSKFNLLSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKKMNNEAEFAYGSGQLNPTRALTPGLIYDMDHFGYIQFLCHEGYSGATLSVLLGSPVNCSSYLLPGAIGHDAINYPTMQLILKSNKDTTIGVFKRTVTNVGLGPTIYNATIKSPKGVEITVKPTSLMFSHTMQKKNFILMVKAKSMASMKIISGSLIWKNSVYYVRSPIVIYSP 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02626 747 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Aip04g02626 747 CDD PA_subtilisin_like 343 467 - -
Aip04g02626 747 Pfam Fibronectin type-III domain 646 744 IPR041469 -
Aip04g02626 747 ProSiteProfiles Serine proteases, subtilase domain profile. 119 595 - -
Aip04g02626 747 Gene3D - 337 473 - -
Aip04g02626 747 SUPERFAMILY Subtilisin-like 122 596 IPR036852 GO:0004252|GO:0006508
Aip04g02626 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 745 IPR045051 -
Aip04g02626 747 CDD Peptidases_S8_3 113 569 IPR034197 -
Aip04g02626 747 Gene3D - 612 746 - -
Aip04g02626 747 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 36 745 - -
Aip04g02626 747 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Aip04g02626 747 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Aip04g02626 747 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Aip04g02626 747 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Aip04g02626 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 115 IPR037045 -
Aip04g02626 747 Pfam Subtilase family 137 587 IPR000209 GO:0006508|GO:0008236
Aip04g02626 747 Gene3D Peptidase S8/S53 domain 138 605 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02626 Aip-Chr4 114812198 114819164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02626 26 583 Subtilisin-like Serine Gene Family AT4G00230 65.950 0.0 743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02626 04 114812198 114819164 Aip04g02626 04 114812198 114819164 ECH
Aip02g02750 02 103446408 103456057 Aip04g02626 04 114812198 114819164 PCT