Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02621 ATGGCCGGGTTAGAAGATTTTTGTGCAGAGCAAGAAGCACCGCTGTACAGTGAAGGAATGAACGTGTTGCATGATTTAGATCCCCAGGAAAGGACACTCGAAGATGTGTCTGATTGTGTTTCCGATTCCGATGAATATTTTGGTGACAATTTCTATGATGATTGGGACAACAGAGCAATTAACGGGATTGCGGACCTCCAAACCGTGAAGTTTAAAGAGCTAACTGCAGATCAGATTCGAAGGCTTCATTTTCCAGATCGATCGGTTGCCTTTTCATTCTACAACTTGTATGCCAAAATGAATGGTTTTTCTGCAAGGAAGAGTCGGATACGACGCAATGTGAACAATGATGTGACACAACAAGCATTTGTGTGCTTTAGACAAGGTTTTAGAGATTTGTGCTCTGATAATGACGCCGCTCGATGCAAACGGGAACCAAAGCCTACAACTAGATGTGGATGTGGGGCAGAGATGCGTGTGCATATACATGAGGAGACAGGCAGATGGATTGTAAGATACTTTCAAGAAAAACACAACCATGAGATGCTTGATGATATGTTAACTTTTATGCTTCCTGGGCATAGGAAAATGAATTCTGCTGCAATTGATCAGATGAACATGATGCTGAAAGTTGGTATTAAAACTCCTCAAATTTATTCATCATTTGTACACACTGTAGGCGGATTTCATAATGTGCCCTTTTTGAAAAGAGATATGTATAATCAGATAGACAAGCAACAGAGGCTCATAGGCGGTGATGCCAAGGCTTGCCTTAAGTATTTAGAATCAACGGCAGCAGAGAGCCCAGGAATGTTCGTGCGATATCTGGCGGATGATGAGGATCGGTTGGTCCACCTTTTCTGGTCAGACAATTGTAGCCAATTGGACTACCATTTGTTTGGGGATGTGGTAGCATTTGATGCGACTTATCGAAAGAATAAGTATATGTGCCCTTTAGTTATGTTTTCCGGTGTCAATCATCATAACCAAACCATTGTGTTTGCATCTGCACTTGTTGCAAATGAGAACGAGGCAACGTATACGTGGTTACTTGAACAGCTTCTAGATGCCATGAAGGGAAAGAAGCCTCGGTGTGTGAttaccgatggacatggagcaatgaaaaaggccattgagactgtgtttgccgatgcttatcaccgcctatgtgcttggcacctgataaggaaTGCAACATCAAATCTCAGCAACCCAACATTTACGTCCGAGTTTAAGAAATGTATGCTTTTTGATTATGAGGTGTCAAAGTTTGAAGAGAAATGGGAGAACTTGGTGTCTAGCTTGGGTCTTCATGACAATGAATGGGTTTGTGATCTTTATGCTAGGCGCAAGATGTGGGCAACCGCTCACATGAGAGGACATTTTTTTGGAGGCTTTCGCACAACCTCTAAATGCGAGGGATTGCATTCTATGCTTGGGAAATTTGTTCATTCGAGGCATAACCTGAGAGATTTTGTTGAACAGTTCTTCCGGTGTATTTTCCAAATGAGATCCAGAGAAGCACAGTCTGATTTACAGTCAATTGTTGGAGACCTAGTACTACAAAGTCCCTTGCATGATTTGGAGAGGTCGGCAGCAAACATGCTCACCAGATAG 1617 0.3995 MAGLEDFCAEQEAPLYSEGMNVLHDLDPQERTLEDVSDCVSDSDEYFGDNFYDDWDNRAINGIADLQTVKFKELTADQIRRLHFPDRSVAFSFYNLYAKMNGFSARKSRIRRNVNNDVTQQAFVCFRQGFRDLCSDNDAARCKREPKPTTRCGCGAEMRVHIHEETGRWIVRYFQEKHNHEMLDDMLTFMLPGHRKMNSAAIDQMNMMLKVGIKTPQIYSSFVHTVGGFHNVPFLKRDMYNQIDKQQRLIGGDAKACLKYLESTAAESPGMFVRYLADDEDRLVHLFWSDNCSQLDYHLFGDVVAFDATYRKNKYMCPLVMFSGVNHHNQTIVFASALVANENEATYTWLLEQLLDAMKGKKPRCVITDGHGAMKKAIETVFADAYHRLCAWHLIRNATSNLSNPTFTSEFKKCMLFDYEVSKFEEKWENLVSSLGLHDNEWVCDLYARRKMWATAHMRGHFFGGFRTTSKCEGLHSMLGKFVHSRHNLRDFVEQFFRCIFQMRSREAQSDLQSIVGDLVLQSPLHDLERSAANMLTR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02621 538 Pfam FAR1 DNA-binding domain 92 183 IPR004330 -
Aip04g02621 538 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 514 IPR031052 GO:0006355
Aip04g02621 538 Pfam MULE transposase domain 303 397 IPR018289 -
Aip04g02621 538 PANTHER OS02G0262500 PROTEIN 88 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02621 Aip-Chr4 114693117 114694837 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02621 MULE 8.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02621 - - aip:107642023 830.861