Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02612 ATGTCTGGCCAAGCAGCATCGCAATTAAAGAGATCGCGTGCGGAGTGGCCGATGGCAACGAAATTTCCTGGACTTTGTAGATCGACAAATCCCGCTTCTGATGATGGTAATCTCGTTCAGAAACTCGCCGGAAAAAAATTCCGGTGGCGGCGTGCGGCAGCGGCAAGGCACCGAAATAGgttcagctgtcgttcttgttgcaacaaggatgcaaatgctacatccaccgtagTTTTCATATTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTAGTCACAATTGAAGATGATAACATTGAAGTTAAGGCCATTTCTGGAGACACTCATCTCAGAGGGAAAGATTTCAATAACAGAATGGTGAGTCACTTGGTACAAGAGTTCAAAAGAAAGATCAGAATGGACATTACTCGGGATCCCAGAGCAATGAGGAGGTTGAGAAACGAATGTGAGAAAGCGAAAAGGATATTTTCACATGCTAATGAGATAGATGCTTTGTTTCAAGGCATTGACTTTCGTTTCTCTATAACTTGTGCAAGGTTTGAAGAACTCAACAGGGACTTGTTTGAGAAGTGCATGGAGATTGCTCAGAAGTGTCTTGATGATGCTAAGATGGAGAAAAGAGAGATACATGACGTGGTCCTTGTTGGTGGATCTTCTAGAATCCCAAAAGTTCAGAATTTATTGCAGAACTTGTTTGAAGGGAAGGATCTTTGCAAGAGTATCAACCCGGATGAAGCTGTTGCTTATGGTGCTGCAATTCAAGCTGCTTTGCTTAGTGAAAGTTATAGCATTGTGCCAAACATGGTACTAGTTGATGTCAAAGTGAGGCTTCTGAGCTTGAGAACTATCTTAAAAAGTTAA 864 0.397 MSGQAASQLKRSRAEWPMATKFPGLCRSTNPASDDGNLVQKLAGKKFRWRRAAAARHRNRFSCRSCCNKDANATSTVVFIFDLGGGTFDVSLVTIEDDNIEVKAISGDTHLRGKDFNNRMVSHLVQEFKRKIRMDITRDPRAMRRLRNECEKAKRIFSHANEIDALFQGIDFRFSITCARFEELNRDLFEKCMEIAQKCLDDAKMEKREIHDVVLVGGSSRIPKVQNLLQNLFEGKDLCKSINPDEAVAYGAAIQAALLSESYSIVPNMVLVDVKVRLLSLRTILKS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02612 287 Pfam Hsp70 protein 74 281 IPR013126 GO:0005524|GO:0140662
Aip04g02612 287 ProSitePatterns Heat shock hsp70 proteins family signature 2. 80 93 IPR018181 -
Aip04g02612 287 SUPERFAMILY Actin-like ATPase domain 76 259 IPR043129 -
Aip04g02612 287 Gene3D Actin; Chain A, domain 4 112 191 - -
Aip04g02612 287 Gene3D - 72 239 - -
Aip04g02612 287 Coils Coil 143 163 - -
Aip04g02612 287 Gene3D - 240 257 - -
Aip04g02612 287 PANTHER HEAT SHOCK PROTEIN 70KDA 69 282 IPR013126 GO:0005524|GO:0140662
Aip04g02612 287 PRINTS 70kDa heat shock protein signature 268 287 - -
Aip04g02612 287 PRINTS 70kDa heat shock protein signature 86 96 - -
Aip04g02612 287 PRINTS 70kDa heat shock protein signature 242 262 - -
Aip04g02612 287 PRINTS 70kDa heat shock protein signature 210 226 - -
Aip04g02612 287 PANTHER HEAT SHOCK 70 KDA PROTEIN 18-RELATED 69 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02612 Aip-Chr4 114450619 114454039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02612 78 283 Calmodulin-binding Proteins AT3G12580 66.351 1.20e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02612 K03283 - aip:107637015 413.305