Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02609 ATGAACAGAGACGAAGTAGTAAATATATTACAGATGTGTGATTATTATGATGGAATTGAAAATGGGATTGTTACTTTGATTGAAAAATCTTTGATAACTCTAAGTAAGGATGAGATGTTGGAAATGCATGATCTGCTTCAAGATATGGGAAAAAATATTGTATTTCAAGAATTTCCAACTAATCCCGGGAAACGAAGCAGGTTGTGGTCTAAAATGGACATTGATCAAGTTTTGACAAATGATATGGGAACTGAAGCAATTCAAGGAATTGTTCTACACTCAAGTTATGAAGCTCGGTGGAGTATTGAAGCCTTTTCAAAGACAAGTCAACTGACATTTCTCAGTTTACATGGCATGAAACTTCCACTTGGTCTCAACTACCTTCCTAGATCATTAAAAGTCCTTCATTGGAATTACTGTCCCTTGAAGACTTTACCCCTGGCGGATCAAAAGTATGAACTGGTTGAAATTAAACTGCGGAATAGCAAGATTGAGCAAGTTTGGCACGGGAAAAAGTTTCTTGAAAAGTTGAAGTACCTGGATTTGAGTGTGTCTGAGAACCTAACTGGAACCCCTGATATTTCTGGTGCACCAATGCTTCAAAAGCTTAATCTGCAATTCTGCTCAGGGCTGAGTGAGGTTCACCCATCCCTTACACACCATGAGAACCTTGTTCAATTGGATTTCAGCAATTGCACAAGTCTCAAAACTATTCCAGGCAAACTGAAGATGAGTTCACTGGAGGAATTAGACCTGAGCAATTGCAGCAGTTTTGTAAACTTGCCAGAATTCGCGGAATGCATGAAACTATCATTGCTTTCATTGAAACGAACCTCCATAAAAAACCTGCCACGTTCTGTCTCATCAAGTCTACCTTTGCTATGCAGTCTAGACTTAAGTTGCTGCAATCTAACTAAACTGGCATTCCCTTGCAACATTTTCCACTTGCCATTGTTGACTGATTTGAATCTGTCTCGTAACAAATTTGTCCATGTACCAATAAGCCTTCATAAACTTCCCAAGCTCAAACGTCTTTGTCTAAATAATTGCCCAAATCTTAAGTCTCTCCCGGTGCTCCCCTCAAGTATTGAGAAATTGGAAGCATGCAATTCTTTCATTGCTTATCATGAATCAGGATTATTTGATCGTTGTGAATCCATATTCAATTTCTTTCGATCATCGAGCAGTGATCGTTCTCAGGTCTTTATCATGGAGTTCACATCATGGGTATATACGAAAGAAAAATTTTCACCGTGGCAATCTTTTTTAAGTTTCAATCTAGAAGATGGTGAACATCTTTCTCTCCCACCACAAGGTGATTTCGCTCCAAATGATAGGTTGGGAATTATACTATGCTTTCAGACAGCTACTTATTTGAACAAGACGGATTTGTGTGTCTGCAATGGTAGAAGATGGATCACCAAGAAGAATTCAGGTGAAAAGGGCAATCGCGTGTATTTTATCCTTCTAACCAATGACTATTTTAGTGATGAATCATGCCCTGATTATACGTTTAAGCTCTCTGTCAACAATGACCTTAATCACAACATGCACAAACAAGCATGGAGCTATGGCTCCAACCAATGCTGGGGCCGCTGGGTGCATCAACAAGATTTTATTGACTAA 1626 0.3893 MNRDEVVNILQMCDYYDGIENGIVTLIEKSLITLSKDEMLEMHDLLQDMGKNIVFQEFPTNPGKRSRLWSKMDIDQVLTNDMGTEAIQGIVLHSSYEARWSIEAFSKTSQLTFLSLHGMKLPLGLNYLPRSLKVLHWNYCPLKTLPLADQKYELVEIKLRNSKIEQVWHGKKFLEKLKYLDLSVSENLTGTPDISGAPMLQKLNLQFCSGLSEVHPSLTHHENLVQLDFSNCTSLKTIPGKLKMSSLEELDLSNCSSFVNLPEFAECMKLSLLSLKRTSIKNLPRSVSSSLPLLCSLDLSCCNLTKLAFPCNIFHLPLLTDLNLSRNKFVHVPISLHKLPKLKRLCLNNCPNLKSLPVLPSSIEKLEACNSFIAYHESGLFDRCESIFNFFRSSSSDRSQVFIMEFTSWVYTKEKFSPWQSFLSFNLEDGEHLSLPPQGDFAPNDRLGIILCFQTATYLNKTDLCVCNGRRWITKKNSGEKGNRVYFILLTNDYFSDESCPDYTFKLSVNNDLNHNMHKQAWSYGSNQCWGRWVHQQDFID 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02609 541 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 286 376 - -
Aip04g02609 541 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 286 376 IPR044974 GO:0006952
Aip04g02609 541 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 288 - -
Aip04g02609 541 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 288 IPR044974 GO:0006952
Aip04g02609 541 Gene3D Ribonuclease Inhibitor 101 242 IPR032675 -
Aip04g02609 541 Gene3D Ribonuclease Inhibitor 243 377 IPR032675 -
Aip04g02609 541 SUPERFAMILY L domain-like 57 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02609 Aip-Chr4 114415299 114417863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02609 1 373 WRKY Transcription Factor Family AT4G12020 35.190 2.72e-48 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02609 - - adu:107485461 1006.51