Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02607 ATGGAGAAGGGGATGCTTTCCTCTTCATTAACATGGTTTGTCACGGCGGTTGGACTACTGGTGGCGGTGGGGGGATGGAAGCTGCTGAACTGGCTCTGGCTGAGGCCTAAGAAGCTCGAGACCCTTCTCAGGGAGCAAGGCTTCCATGGCAACCTCTACACGCTCTTCGCCAACAACAACAACTCTTCTAATAACACGAAGCCAATGACTCTCTCTGATGACAAGGACATAACTCCACGTGTCTATTCTCAAGCCGATCATGCTATCATGAAATTTGGGAAGAATTCATTCTTTTGGGAAGGTCGGACACTCAAGGTGAATATCACAAACCCTGAGCATATTAAAGAAGTTCTTACCAATAACCGTTACTTCAAGAAAGAGAAGCCTAATATGATGCGTCTTGCCACGTTACTGGGATCTGGACTTCCGAACTATGAGGACCAACAATGGCACACACATCGAAGGATCATCAACCCTGCTTTCCATCTCGAAAAATTAAAAGTTCTAACATCAACAATGGTCCAATGCTGCGATGATGTGATTACTAAATGGGAGGAGATGCTGTCTTCAGAGGGTAAATGCGACATTGATGTATGGCCTTCCATCCAAAATTTGGCTTGCGATGTTATTTCCAGAACAGCCTTTGGAAGCAGTTACCAAGAAGGAAAAAGAATTTTTGAACTCCTTACCAAGCAAGCTAGACTTATAATGAGATTAAAATATGTTCACATCCCAGGATGGTGGTTGCTTCCTAATAGTGTTAACAGGAGCCAAGAAACGACAGCTGATTTGATGGTATGGACAGTGGTGATGCTAAGTAGGTATCCGGAATGGCAAACGCGTGCGAGGGAGGAAGTATTCCAAGTCTTTGGCAACCGAAAGCCAGACAGTGATGGCCTGAATCGCCTTAAAACTGTGACAATTATCTTAAACGAGGTGTTAAGGCTATACCCGCCGGTCCTTTTTTTCAATCGAAGAGTCCAGAAAGATATAAAGATGCAAAATCTATCACTACCTGCCGGAGTTAAGGTTACATTACCAATACTTTTGATACACAAGGATCGTGAATTATGGGGTGATGATGCAACAGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTGCTAAAGCGACTAAGGGTCGGCTCTCATATTTTCCATTTGGATGGGGGCCTAGAATATGCATTGGCCAAAACTTCTCCTTAATGGAAGCAAAGATATTCTTGACATTGCTTTTACAACGCTTCACATTTGAGCTCTCCCCTGCATATGCACATGCTCCAGTCATTTTCCTTACTCTTAAACCGATGCATGGGGCCCAAATCATCACCATAAATTGTAGTTTCAAGTGTGTACAAGCCTTTGGAATCTCTACTTTCATACCAAGTGGCGCCTCCAAATATAAGTAA 1407 0.4335 MEKGMLSSSLTWFVTAVGLLVAVGGWKLLNWLWLRPKKLETLLREQGFHGNLYTLFANNNNSSNNTKPMTLSDDKDITPRVYSQADHAIMKFGKNSFFWEGRTLKVNITNPEHIKEVLTNNRYFKKEKPNMMRLATLLGSGLPNYEDQQWHTHRRIINPAFHLEKLKVLTSTMVQCCDDVITKWEEMLSSEGKCDIDVWPSIQNLACDVISRTAFGSSYQEGKRIFELLTKQARLIMRLKYVHIPGWWLLPNSVNRSQETTADLMVWTVVMLSRYPEWQTRAREEVFQVFGNRKPDSDGLNRLKTVTIILNEVLRLYPPVLFFNRRVQKDIKMQNLSLPAGVKVTLPILLIHKDRELWGDDATEFKPERFSEGIAKATKGRLSYFPFGWGPRICIGQNFSLMEAKIFLTLLLQRFTFELSPAYAHAPVIFLTLKPMHGAQIITINCSFKCVQAFGISTFIPSGASKYK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02607 468 Gene3D Cytochrome P450 257 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 Pfam Cytochrome P450 91 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 Pfam Cytochrome P450 257 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506|GO:0016705
Aip04g02607 468 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS E-class P450 group I signature 384 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PANTHER CYTOCHROME P450-LIKE 258 444 - -
Aip04g02607 468 PANTHER CYTOCHROME P450-LIKE 10 256 - -
Aip04g02607 468 SUPERFAMILY Cytochrome P450 88 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PANTHER CYTOCHROME P450 FAMILY MEMBER 258 444 - -
Aip04g02607 468 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 256 - -
Aip04g02607 468 Gene3D Cytochrome P450 70 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS P450 superfamily signature 256 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02607 468 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02607 Aip-Chr4 114405288 114408971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02607 26 442 Cytochrome P450 AT3G14630 41.344 4.22e-126 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02607 - K17873 mtr:MTR_2g072330 385.956