Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02579 ATGCCAAAATTGGTTGAAGTGAATCTTGAGGGGAATTCCATCGAGGGTTCTATCCCAGACTTATCCAATTCCACCAGCTTGCAATATCTATTGCTTGCAAACAATCGGTTAACGGGTGTAGTTCCACCTTTTCTGGGATTTCTCAATAATATCTCTCAAGTTTCATTGGAAAACAACTGGTTGCAGGGTCCTCTTCCTGCATTTAATAAGAGTCGGGCTCCAAAGCTAAATTTCACTTCTAATGGATTCTGTTTAGACCATCCTGGACCTTGTGATCACAGAGTCATCACTCTGCTTCAAGTTGCTCAGACACTTTATTATCCATTTCTGCTGGCACAATCGTGGCGAGGAAACAATCCGTGTCAAGATTGGAATTTTATCACCTGTGATGATAAGGGCAACATCAGAACCGTAAATTTGACCAACTTGAATTTGACGGGAACAATATCTCTCTCATTCAAGAATTTAACGGTTCTGGAAGGATTGTATCTTGGTGGAAATAGACTGAACGGTTCCATACTAGATATCTTGACAAGTCTACGACAACTCAAGATTCTGGATGTGTCTAACAATAATTTATCGGGAAGTCTTCCACCGTTCTCAAAAAAAACCATTGTCATTACCACAGGCAATGCTTTTCTCCAGCAGTCTCACTCGCCGAAAACCTCGCTCTCTTCTACTTTCATTATAGGTATATCAGCTGGTGTTGGCGTTATTGTAATGATCTTTGTTGCAATTTCTTATTATTGCAAGAGGCATTTCAGTAGGATAATGCTGAACAAAGAAACATCTCTTGTTCGACAATTTGGGGAGCAAATAAATAATGCAACACTAGTGAGATATACTTATGCAGAAGTAGAACAGATGACAAACTCATTTCAAGAAGAGTTAGGAAAAGGAGGATTTGGTATTGTATACAAAGGAAGTTTAAATGATGGTTGTCAACTGGCAGTGAAGATACTTAAGGAGATGAAAGGAAGTGCAGAAGAATTTGTAAACGAGGTTGTTACTATCAGTAGAACATCTCATGTGAACATTGTTTCACTTTTGGAATTTTGCTATGAAATGAATAAACAGGCTCTTATTTATGAATTCATGTCTAAGGGCTCTTTGGATAAATATAAATGTAAAGAGGGATCTTCCGAGTTAGATTGGAAAACACTACTTCAGATTGTAACTGGCGTTGCTCAAGGGTTAGACTACTTACATCGAGGGTGCAATACAAGAATTTTGCATTTTGATATCAAACCCCAAAATATGCTTCTTGATGAAAAATTTTGTCCAAAAATTGCTGATTTTGGACTAGCTAGAATATGCAAAAAGGATGAAAGTGTTGTGTCTATATTAGACAGAAGAGGGATTCCGGGTTATATTTCACCAGAAATGTTTAGTCGAAGGAATGGTAGAGTTTCTCACAAGTCAGATGTATATAGTTATGGAATGCTAATTCTTGAAATGATTGGAGGAAACGATAATTATGATATTGGAGAATCTCATAGTACTGAATACTTTTCTGATTGGATTTTGAAGGATATCAAAGAAGATAAAATTCGTCTATTGAGATTTGCTTCTGGAAAAGATGATGAAGATATAATAAAAAAGATTTTATTTGTCGGTTTATGGTGCATCCAAATGAATCCATCAGATAGACCAAAAATGTGTAAAGTGGTGGAAATGTTACAAGGAAAACTTGAATCAATATCACTAGAGTCCATCATATCTTCTCCGACAGTACCTCTCTTATAG 1746 0.3671 MPKLVEVNLEGNSIEGSIPDLSNSTSLQYLLLANNRLTGVVPPFLGFLNNISQVSLENNWLQGPLPAFNKSRAPKLNFTSNGFCLDHPGPCDHRVITLLQVAQTLYYPFLLAQSWRGNNPCQDWNFITCDDKGNIRTVNLTNLNLTGTISLSFKNLTVLEGLYLGGNRLNGSILDILTSLRQLKILDVSNNNLSGSLPPFSKKTIVITTGNAFLQQSHSPKTSLSSTFIIGISAGVGVIVMIFVAISYYCKRHFSRIMLNKETSLVRQFGEQINNATLVRYTYAEVEQMTNSFQEELGKGGFGIVYKGSLNDGCQLAVKILKEMKGSAEEFVNEVVTISRTSHVNIVSLLEFCYEMNKQALIYEFMSKGSLDKYKCKEGSSELDWKTLLQIVTGVAQGLDYLHRGCNTRILHFDIKPQNMLLDEKFCPKIADFGLARICKKDESVVSILDRRGIPGYISPEMFSRRNGRVSHKSDVYSYGMLILEMIGGNDNYDIGESHSTEYFSDWILKDIKEDKIRLLRFASGKDDEDIIKKILFVGLWCIQMNPSDRPKMCKVVEMLQGKLESISLESIISSPTVPLL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02579 581 SUPERFAMILY Protein kinase-like (PK-like) 273 560 IPR011009 -
Aip04g02579 581 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Aip04g02579 581 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Aip04g02579 581 Pfam Protein tyrosine and serine/threonine kinase 293 560 IPR001245 GO:0004672|GO:0006468
Aip04g02579 581 ProSiteProfiles Protein kinase domain profile. 291 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02579 581 Gene3D Phosphorylase Kinase; domain 1 255 365 - -
Aip04g02579 581 PANTHER RUST RESISTANCE KINASE LR10-RELATED 35 568 IPR045874 GO:0004672
Aip04g02579 581 Gene3D Transferase(Phosphotransferase) domain 1 366 572 - -
Aip04g02579 581 SMART serkin_6 291 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02579 581 Gene3D Ribonuclease Inhibitor 93 217 IPR032675 -
Aip04g02579 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Aip04g02579 581 PANTHER TYROSINE KINASE FAMILY PROTEIN 35 568 - -
Aip04g02579 581 SUPERFAMILY L domain-like 2 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02579 Aip-Chr4 113801095 113803178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02579 276 581 Receptor kinase-like Gene Family AT5G38280 55.627 8.21e-115 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g02579 PK_Tyr_Ser-Thr 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02579 - - ahf:112743101 1120.15