Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02573 ATGGGGAGAGAGCAAAATCTAACCGAAACCCTAAATTACAACCGTCGCCATCGCCGTGCCGTCGCTACCGCCATTGCCACCGCCACCGCTACAACCATTCATCTCCTTGATACTAGCGCCAATGCCACCACGTGCTTCGACGATTTCTTTTCCCGTTGTCTCTTCCGTCGATGCGTCTCCTCAGGTTGCGATACGGTCACTTTTGAGAAAGAACCCATGCCTTCGAGCCCCGCCAGCGGTGAAGAAAGCAACGAAAAGAAAAGCTTCTCCTCCAAAAACAAATTCTCTTCCCGAAATGCTTCTTCCAAGTACGATTTCGTTAAGATTCCAAATCATGTAGCTATTAAAATTGCTCTTGAACTGAAGAAGCTCCTCATTGACAATAGTCTTCTATATGTCTCTCAGTCCAATTTGGAGGTCAACTTATTCAAGGTAATGGAGAGCCGGGGATATGGAGAAGAGTACATTAGTCATTATAAGATGATGACAAGGTTTCATCATCAAAGAGTTCCATTGGTAATCCTTGTTTGTGGCACTGCTTGTGTTGGGAAGTCTACTATTGCCACCCAGCTTGCGCAGAGGCTAAATTACCAAATGTGTTGCAGGTTTGTTATGAAAAATGGCGCCAAGGAATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTCCTCAGGGCAACCAGTCAAGAACTACATTGATTCTGCTGTAAGACATGTACTCCTTAGGGATTTGGATAAGAAATGTTGCAGATGA 795 0.4553 MGREQNLTETLNYNRRHRRAVATAIATATATTIHLLDTSANATTCFDDFFSRCLFRRCVSSGCDTVTFEKEPMPSSPASGEESNEKKSFSSKNKFSSRNASSKYDFVKIPNHVAIKIALELKKLLIDNSLLYVSQSNLEVNLFKVMESRGYGEEYISHYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNYQMCCRFVMKNGAKECEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKNYIDSAVRHVLLRDLDKKCCR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02573 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 198 IPR027417 -
Aip04g02573 264 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 108 198 - -
Aip04g02573 264 Pfam Ribosomal protein S3, C-terminal domain 187 255 IPR001351 GO:0003735|GO:0006412
Aip04g02573 264 SUPERFAMILY Ribosomal protein S3 C-terminal domain 186 255 IPR036419 -
Aip04g02573 264 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 108 198 - -
Aip04g02573 264 Gene3D - 180 257 IPR036419 -
Aip04g02573 264 MobiDBLite consensus disorder prediction 69 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02573 Aip-Chr4 113537321 113540139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02573 200 256 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 84.211 3.81e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02573 - - aip:107639128 468.774