Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02563 ATGGCTTCCAGCAACATTCATCGAAACGGCACCCAAAGAGGAATCATTAGCAACAAGTTCGATCGCCCTCTCAAGCCCCGCCACCGCCCTCCCTCTCCGGGATCCACTTTCAGAGAGAGAGAGAGAGAGAGAGGGAAAGAATTGCCTGGAAGAGTTCGAGTGGCAGTGAGATTGAGACCTCGAAATGCTGAAGAAATGATAGCAGATGCTGATTTTGCTGACTGTGTCGAACTGCAACCAGAGCTTAAAAGGTTGAAACTTCGTAGAAACAACTGGGATTCTGACACATACGAGTTTGATGAGGTGCTTACTGAATATGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTTGAGAGTGTTCTTGATGGCTACAATGGCACTGTAATGGCTTATGGTCAAACCGGAACGGGGAAAACATTTACTCTTGGAAGTTTGGGGGAAGGAGACACCTCTGATCGTGGTATAATGGTTCGTTCGATGGAGGATATTTTTGCCGAATTGTCTCCAGATACAGATTCCATCACTGTCTCATATCTGCAGCTTTACATGGAGACTCTCCAGGACCTGCTTAATCCAGTAAATGATAATATTCCTATAGTGGACGATCCTAGAACTGGTGACGTATCTTTGCCTGGAGCAACACTTGTAGAAATCAGGGACCAGCAGAGTCTTCTGGAGTTATTAAGAGTCGGGGAAGCTAATCGGATTGCTGCTAACACAAAGTTGAATACAGAATCTTCCCGTAGTCACGCTATTCTCATGGTACATATTAAGAGGTCTGTCATGGATAATGAAGATATCGAATCTAGTGAAAATGGTGGTGATACACCAAACTTTATTACTAAACCTTCAAAACCACTTGTTAGGAAGAGCAAGCTAGTTGTGGTGGATTTAGCTGGTTCAGAGCGTGTCCATAAGTCAGGAAGTGAAGGACACATGCTAGAAGAAGCCAAATCAATCAACCTTTCACTTAGTTCACTGGGAAAGTGCATTAATGCTCTAGCAGAGAACAGTGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTTCGAGATTCTTTTGGAGGCACAGCAAGGACATCATTGATTGTGACCATTGGCCCATCTCCACGTCACCGAGGAGAGACTTCTAGCACCATATTATTTGGCCAAAGGGCTATGAAAGTTGAAAATATGCTGAAAATTAAGGAGGAGTTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTGCAGTTGGATAAGCTTATTGCAGAAAATGAAAGGCAGCAAAAAGCTTTTGATGACGAAGTTGAAAAAATAAACTTGGAAGCACAATGTCGTATTGCTGAGGTTGAGAGGAATTTTGCAGATGCATTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAATTGGTAAAGGAGCTGGAGCAGAAATTAGTGTTAAATCAAGAAAGACATGACTGTAATCGTTTTGTGGCTGATTGTGGCGAGGGACCTGCATCATCTTCTGCAGATGTGTCTGAGCTCAAAATGTTGCTTGAAAAAGAAAATAAGCAAAGAAAGGCAGCTGAAGAAGAGTTAGAACGTCTAAAAGGTCAGCTGGGGAAACATACCCGATCAGAGGGAGGAGAGGATCTGGAGGTTATTAAGCTGCGCAACTTCCTTGAGGATGAGGCTAATCAGAAAAAGAAGCTTGAAGAAGAGATAATAATATTAAGAAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGGTGTTTGGAAAGTGGTAGCTCAGGGAGCTCATTTCCCTCCATTGATCCTTCTATGACACATGTTAGGCATTCCCAGCTCAAAGACACTGGGAATGGTCCAAAGTCTTCAGTCACTACTCTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATATGCGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAAAGAATTGTCGAATCTGGTGGTCTCACTTCCTTATTGATGCTTCTTAGAAGATACGAGGATGAAACTGTTCGCCGAGTGGCAGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAACCAAGAACTTATCATGGCAGAAGGAGGAATAACTCTCTTATCAATGACAGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATCGCTAACCTTTGTGGAAATGATAAAATATTGATGAAGCTGAGATCTCAAGGAGGTATCAAGGCTTTACTAGGAATAGTTAGATGTGGGCATCCCGATGTTCTATCCCAAGTCGCACGAGGAATAGCTAACTTCGCAAAATGCGAATCTCGATCATCTAATCAAGGGATAAAAAGTGGTCGATCTTTCTTGATAGAAGATGGTGCACTACCTTGGATAGTACAAAATGCTAATAACGAGGCTGCACCCATCAGGCGTCATATTGAGCTTGCGCTCTGCCACTTGGCACAACATGAAGTGAATGCAAAAGACATGATTAGCGGAGGAGCTCTTTGGGAGCTCGTCCGGATTTCAAGGGATTGTTCACGAGAGGACATTCGCAGTCTTGCTCGCCGGACTCTCAGTTCTATCCCGACATTCAAATCTGAACTGCGACGACTGCGGATAGAATGTTGA 2676 0.4346 MASSNIHRNGTQRGIISNKFDRPLKPRHRPPSPGSTFRERERERGKELPGRVRVAVRLRPRNAEEMIADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEYASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGSLGEGDTSDRGIMVRSMEDIFAELSPDTDSITVSYLQLYMETLQDLLNPVNDNIPIVDDPRTGDVSLPGATLVEIRDQQSLLELLRVGEANRIAANTKLNTESSRSHAILMVHIKRSVMDNEDIESSENGGDTPNFITKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENSAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFDDEVEKINLEAQCRIAEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHDCNRFVADCGEGPASSSADVSELKMLLEKENKQRKAAEEELERLKGQLGKHTRSEGGEDLEVIKLRNFLEDEANQKKKLEEEIIILRSQLLQLNFEADQMRRCLESGSSGSSFPSIDPSMTHVRHSQLKDTGNGPKSSVTTLFEQVGLQKILSLLESDDANMRIHAVKVVANLAAEEANQKRIVESGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRSSNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPTFKSELRRLRIEC 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02563 891 ProSiteProfiles Kinesin motor domain profile. 51 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 Gene3D - 724 890 IPR011989 -
Aip04g02563 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 431 IPR027417 -
Aip04g02563 891 MobiDBLite consensus disorder prediction 20 48 - -
Aip04g02563 891 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 633 675 IPR000225 GO:0005515
Aip04g02563 891 Gene3D - 623 723 IPR011989 -
Aip04g02563 891 SUPERFAMILY ARM repeat 626 878 IPR016024 -
Aip04g02563 891 MobiDBLite consensus disorder prediction 1 48 - -
Aip04g02563 891 MobiDBLite consensus disorder prediction 1 16 - -
Aip04g02563 891 Coils Coil 507 541 - -
Aip04g02563 891 Pfam Kinesin motor domain 57 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 Gene3D Kinesin motor domain 42 426 IPR036961 -
Aip04g02563 891 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 674 717 IPR000225 GO:0005515
Aip04g02563 891 CDD KISc 51 393 - -
Aip04g02563 891 SMART arm_5 705 746 IPR000225 GO:0005515
Aip04g02563 891 SMART arm_5 623 662 IPR000225 GO:0005515
Aip04g02563 891 SMART arm_5 747 787 IPR000225 GO:0005515
Aip04g02563 891 SMART arm_5 663 704 IPR000225 GO:0005515
Aip04g02563 891 PANTHER KINESIN-LIKE PROTEIN 33 881 IPR033291 GO:0008017|GO:0032886|GO:0048364
Aip04g02563 891 PRINTS Kinesin heavy chain signature 127 148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 PANTHER KINESIN-RELATED 33 881 IPR027640 GO:0003777|GO:0007018
Aip04g02563 891 Pfam Armadillo/beta-catenin-like repeat 666 703 IPR000225 GO:0005515
Aip04g02563 891 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip04g02563 891 SMART kinesin_4 49 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g02563 891 Coils Coil 549 583 - -
Aip04g02563 891 Coils Coil 440 475 - -
Aip04g02563 891 Coils Coil 411 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02563 Aip-Chr4 113052091 113063857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02563 36 442 Calmodulin-binding Proteins AT5G65930 32.783 1.29e-47 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02563 - K10396 gmx:100789455 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02563 04 113052091 113063857 Aip04g02563 04 113052091 113063857 ECH