Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02551 ATGATTGTTAAGGGGCTTTCACATATTCATCGCAAAGGAATAGTCTACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATCGAAAACCAAAAAGGAGGAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCTAGAGGTATGCCGGCATACTTGTCACCGGAAGCGTTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGGTATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCTCTTTGCTTACTGAGGAGTTGAGGTACTTAATTGAGCATCATGAACTATCACCCAAGAAGCCACAGGGAATCAGTTTTTTCTATCATGATTTTCTGGAAAAGTGCTTTACGAAGGATCCTTGCAAGAGGTGGACTGCTGACATGCTTCTTGATCATCCTTTCCTTTATATCACACTGTTTCATTCATATTATCTTGTTATGATTATTTTTCTTAATTAG 534 0.4064 MIVKGLSHIHRKGIVYCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKKEEADVELWKSKPRGMPAYLSPEAFSGHIDAPMDIWALGCIGIEMLTGLPAWGESSLLTEELRYLIEHHELSPKKPQGISFFYHDFLEKCFTKDPCKRWTADMLLDHPFLYITLFHSYYLVMIIFLN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02551 177 Gene3D Transferase(Phosphotransferase) domain 1 1 161 - -
Aip04g02551 177 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
Aip04g02551 177 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 163 - -
Aip04g02551 177 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02551 177 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 163 - -
Aip04g02551 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 14 26 IPR008271 GO:0004672|GO:0006468
Aip04g02551 177 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02551 177 Pfam Protein kinase domain 2 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02551 Aip-Chr4 112718750 112719283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02551 2 162 MAP Kinase Kinase Kinase AT4G36950 43.030 1.01e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip04g02551 Pkinase 4.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02551 - - aip:107647754 321.627