Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02547 ATGGAAATGAAAGGTGCGAAGCCGAGAAGACGACGATACCCTCTCTCCGATCGCACTAACTCATCTTCTTCCAACAACTTCAACAAATCTGTCACCAAATGCAACTCTCTTCTTCTTCTTCTTCCTCCTCAACCTACTCCTCCCGTGGAACACATGAAAGGAGGAATAACCATAACTTATGCAGTGGAACGCATGAAAGAAGATTGCAGACCTTCCAACTCCTCTGAATCTGTTGATGTTGGTTTGGTTATGCGACAATCATCTCATCTTTCTGAAGTTGTAATCATGTTGGTTATAAACCATCAGCCTTATGATCAGAAAGCAGATGTGTTCAGTTTTTCTATAATACTCTGGGAACTAGTGACGGCAAAGGTGCCTTATGATACAATGACTCCGTTACAAGCTGCCTTCGGTGTCAGACAGGGATTGTGCCCAGAACTTCCAAAGCATGGTCACCCTAAACTATTATATTTGAGGCAACGATGTTGGGAAGCAGATCCAAGCAACCGGCCGAGTTTCCAGGAGATAACGATTGAACTTGAGAATCTTTTACAACAAGTTGATAATGATTCACAAGCTAATGGTGCTTGA 591 0.4281 MEMKGAKPRRRRYPLSDRTNSSSSNNFNKSVTKCNSLLLLLPPQPTPPVEHMKGGITITYAVERMKEDCRPSNSSESVDVGLVMRQSSHLSEVVIMLVINHQPYDQKADVFSFSIILWELVTAKVPYDTMTPLQAAFGVRQGLCPELPKHGHPKLLYLRQRCWEADPSNRPSFQEITIELENLLQQVDNDSQANGA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02547 196 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 98 190 - -
Aip04g02547 196 Pfam Protein tyrosine and serine/threonine kinase 98 179 IPR001245 GO:0004672|GO:0006468
Aip04g02547 196 MobiDBLite consensus disorder prediction 1 16 - -
Aip04g02547 196 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 190 - -
Aip04g02547 196 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02547 196 MobiDBLite consensus disorder prediction 1 29 - -
Aip04g02547 196 Gene3D Transferase(Phosphotransferase) domain 1 66 195 - -
Aip04g02547 196 SUPERFAMILY Protein kinase-like (PK-like) 98 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02547 Aip-Chr4 112681172 112683250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02547 98 192 MAP Kinase Kinase Kinase AT4G35780 53.125 1.70e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip04g02547 PK_Tyr_Ser-Thr 7.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02547 - - gmx:100797987 177.948