Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02533 ATGGATAATATACACTTACTAAACTTGAAAGTGTTAAGAGAAGGTTCACCTTCATCATTATTTCCAAGTCTCTCAGAGCTTTGTTGGTTAGATCTCTCTTACTGTGGATCCCTCACATCCCTTCCAATTAACCTTTTTAAGCTGAAATGGCTAAGAAAACTATATCTTCGTGGCTGCTCAAATCTCGAGAAGCTCCATGAGATAGAAGAGGATATGGAAAATTTAATGGTGCTCATCTTAGATGAATCAGGAGTACAAGAATTACCTTCAACAATACAAAATTTGGTAGGTCTTGAGGAGTTGAGCTTGCATGGTTGCAGAAGCCTTGTGTTCATTGTATCTTCAATTGGACATCTCAGCAAACTCAGCATTCTTGATCTTACCTACTGTGAAGCACTTGAATCTCTTCCTAGCAGCATTTTCAACCTGAAGTTGACAAAGCTTGATTTGCATGGTTACTCAATGCTGAAGACTTTACCAGAGATCATGGAACCTGCAGAATCTTTTGCTCACATGAACCTGGTAAAAACAACAATTAAAGAAATACCCTCATCCTTGGCTTATTTGGTTGGGCTTCAAACCTTGCAGCTCAACTTGTGCAAAGATCTTGAGTTTCTTCCAAATAGCATTGGTAATTTAAACCTTCTCTCCAAGCTTGATTTTTCTGGCTGTGAGAAACTCTCAGAACTTCCTAGCGACATTGGAAACTTGTCATCATTAAGGAAATTGTCACTGCACGAAAGCAGTATTGTGGACCTTCCTGAGAGTATTGCTCATCTTTCAAGCTTGAAATCACTGGATTTAAGTGATTGCAAGAAGCTTGAAAATATCCCAGTCCTTCCACCATTTTTAGAACACTTTGTGGCATTTGATTGCCCATCTGTTAGGAGAGTGTCAAATTCAGGATTTGACATTAAACTTACATCAAATTCCAAAGATGGTATTTTTAAGTTTCACCTTACCAATAGCCAAGAACTGACTCAAAGTTCTAAGAGTAATATTGCTGGTGAAGCATGGCAAAGAATGCTAGATAATGCATATAGGTCTAGTGCTTTGAAGAGACCATGTGCTTTGCACTAA 1080 0.3833 MDNIHLLNLKVLREGSPSSLFPSLSELCWLDLSYCGSLTSLPINLFKLKWLRKLYLRGCSNLEKLHEIEEDMENLMVLILDESGVQELPSTIQNLVGLEELSLHGCRSLVFIVSSIGHLSKLSILDLTYCEALESLPSSIFNLKLTKLDLHGYSMLKTLPEIMEPAESFAHMNLVKTTIKEIPSSLAYLVGLQTLQLNLCKDLEFLPNSIGNLNLLSKLDFSGCEKLSELPSDIGNLSSLRKLSLHESSIVDLPESIAHLSSLKSLDLSDCKKLENIPVLPPFLEHFVAFDCPSVRRVSNSGFDIKLTSNSKDGIFKFHLTNSQELTQSSKSNIAGEAWQRMLDNAYRSSALKRPCALH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02533 359 Gene3D Ribonuclease Inhibitor 3 147 IPR032675 -
Aip04g02533 359 Gene3D Ribonuclease Inhibitor 148 306 IPR032675 -
Aip04g02533 359 PANTHER TMV RESISTANCE PROTEIN N-LIKE 113 213 - -
Aip04g02533 359 PANTHER TMV RESISTANCE PROTEIN N-LIKE 2 119 - -
Aip04g02533 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING 113 213 - -
Aip04g02533 359 PANTHER TMV RESISTANCE PROTEIN N-LIKE 205 278 - -
Aip04g02533 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING 205 278 - -
Aip04g02533 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 119 - -
Aip04g02533 359 SUPERFAMILY RNI-like 18 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02533 Aip-Chr4 112277166 112278245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02533 98 280 WRKY Transcription Factor Family AT4G12020 37.705 2.25e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02533 - - adu:107481402 625.165