Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02494 ATGCTTTGCACCCCTAAAAGAGAAGCGATGAGCACAACCAACATGGGTACTATGATTCCAAATTGGAGAAGGATATATGGATATGTTTTGGCTCTTTCATTTTGTTATTTAATTTCCACAACAGTGGCACAGAGCACACACCCCTCAGAAGTGAATGCATTGTTACAAATCAAGAAAAGTTTGATTGATCCCTTAAACCATTTGTGGAACTGGAACAAAGGTGATCCATGTACATCAAATTGGAATGGTGTCTTGTGTCCTCTAAATGTTGGGGCTGATGGTCATTTCCATGTCAAAGAGCTCTACTTAATGACTATGAATCTCTCTGGAAATTTGACACCCCAACTTGATCAGCTATCTCAACTAGAGATAATGAACTTCATGTGGAATAACATAACAGGAAGTATACCCAGGGAGATAGGAAATATCACATCATTGAGACTCTTGCTCCTGAATGGAAATGCACTATCAGGTAATTTACCATATGAGCTTGGCAATCTTCAAAATCTAAACAGATTTCAAGTTGATCAAAACCAACTCTCCGGTCCAATACCGCCTTCATTCGCCAACTTGAGCTCTGTCAAGCACATCCACATGAACAACAACTCATTTAGTGGTCAAATTCCTCCCAAACTTTCAAACCTATCCAACCTTCTTCACTTGCTTCTGGATACCAATAATTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACCCCAGCTGCGGATACTCCAACTTGATAACAATCACTTCACAGGGAGCAGAGTTCCTTCTTCCTATGCAAACTTATCTAGACTAGCAAAATTAAGTCTCAGAAACTGCAGTTTGCTAGGAGAAGTACCTGATCTCAGTTCAATACCACAGCTTTACTATCTAGATCTTAGCTGGAACAATCTTACTGGACCGATACCATCAAAAAAACTTGCTGAAAATATGACTACCATTGATCTTTCTAATAATAATCTGAATGGATCAATTCCTGGATACTTCTCAGAGCTACCTTCTCTTCAAAGACTGTCTCTTGAGAACAACAACTTTTCAGGATCAATCTCTGCTAAGATATGGCAGAAGATGACTCTCACTACTAATGCTAAATTAACAATCGACCTACGAAACAACTCACTTTCAAGAATTTTGGGAGATCCGAGTCCTCCGCCCAACGTCACCTTAAGGCTTGGAGGAAATCCTATATGTAAGAGTTCTCAAACTAGTGGAATATTGGCCAAACAATGTGGATTTGAAGGAGAAGAAGAAGACAATCACTTAACAAATTCAACAACTACATGTCCCCCTCAAGCTTGTTCAGTGAATGATTTCTTTGAATATGTCCCAGATTCACCTATTCCTTGCTTTTGTGCATCACCTCTTAGAATTGGATACCGGCTGAAAAGCCCGAGTTTTTCTTTCTTCCCACCATACAAAGCTTCATTTAGATCATATGTTACCCATGCTTTGAACTTGGACTTCTATCAGCTATCAATAGATTCATATTCTTGGGAAGAAGAAGAAACTCGTCTTAGGATGTATTTGAAACTCTTTCCTGAGGCTAGTTATTCACACAATGAGTTCAATTCATCCGAGGTCTATCGAATGCGAAGCATATTCTCGTCGTGGAATTTTGGTGGAAGTGATTTTTATGGGCCATATGAACTTTTGAATTTCACCCTTGAAGGACCTTATGCATATTTAATTACAAAATCAGAAAAGAGCAAAAGTAGTAGATTGGAAATCATTTTTGCTGTAGTAGCAGCTGTGGCAGTTGTTATAGCAATCTCAGCAATAGTCACTCTCATTATTGTAAGAAGAGATATCAAAAACCAGGACAGATTTTCGAGAAGACGTCGCTCCTCTAGTATTCCTATCAAAATAGATGGTGTAAAAGAATTCACTTTCAAAGAAATGGTTCTTGCCACTGATAGTTTTAGCAGTTCGAATCAAGTCGGCCGAGGAGGTTATGGAACCGTTTATAAAGGCACTCTACCTGATGAAACAATTGTTGCCATAAAGAGAGCACAAGAAGATTCCCTACAAGGAACAAGGGAATTCTTGAATGAGATTGAACTACTATCGAGGTTACATCATCGAAATCTAGTCTCCTTGATTGGATATTGTGATCAAGAAGGGGAGCAGATGCTTGTTTATGAATTTATGCCTAATGGCACCTTACGCGATTGGCTTTCAGGTATGAGAATTTAG 2199 0.3893 MLCTPKREAMSTTNMGTMIPNWRRIYGYVLALSFCYLISTTVAQSTHPSEVNALLQIKKSLIDPLNHLWNWNKGDPCTSNWNGVLCPLNVGADGHFHVKELYLMTMNLSGNLTPQLDQLSQLEIMNFMWNNITGSIPREIGNITSLRLLLLNGNALSGNLPYELGNLQNLNRFQVDQNQLSGPIPPSFANLSSVKHIHMNNNSFSGQIPPKLSNLSNLLHLLLDTNNLSGYLPPEFSMLPQLRILQLDNNHFTGSRVPSSYANLSRLAKLSLRNCSLLGEVPDLSSIPQLYYLDLSWNNLTGPIPSKKLAENMTTIDLSNNNLNGSIPGYFSELPSLQRLSLENNNFSGSISAKIWQKMTLTTNAKLTIDLRNNSLSRILGDPSPPPNVTLRLGGNPICKSSQTSGILAKQCGFEGEEEDNHLTNSTTTCPPQACSVNDFFEYVPDSPIPCFCASPLRIGYRLKSPSFSFFPPYKASFRSYVTHALNLDFYQLSIDSYSWEEEETRLRMYLKLFPEASYSHNEFNSSEVYRMRSIFSSWNFGGSDFYGPYELLNFTLEGPYAYLITKSEKSKSSRLEIIFAVVAAVAVVIAISAIVTLIIVRRDIKNQDRFSRRRRSSSIPIKIDGVKEFTFKEMVLATDSFSSSNQVGRGGYGTVYKGTLPDETIVAIKRAQEDSLQGTREFLNEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEFMPNGTLRDWLSGMRI 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02494 732 Gene3D Ribonuclease Inhibitor 47 208 IPR032675 -
Aip04g02494 732 ProSitePatterns Protein kinases ATP-binding region signature. 648 670 IPR017441 GO:0005524
Aip04g02494 732 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 29 729 - -
Aip04g02494 732 ProSiteProfiles Protein kinase domain profile. 642 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02494 732 Pfam Protein tyrosine and serine/threonine kinase 645 728 IPR001245 GO:0004672|GO:0006468
Aip04g02494 732 Gene3D Ribonuclease Inhibitor 311 418 IPR032675 -
Aip04g02494 732 SUPERFAMILY Protein kinase-like (PK-like) 613 731 IPR011009 -
Aip04g02494 732 Gene3D Phosphorylase Kinase; domain 1 613 717 - -
Aip04g02494 732 SUPERFAMILY L domain-like 61 400 - -
Aip04g02494 732 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Aip04g02494 732 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 29 729 - -
Aip04g02494 732 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Aip04g02494 732 Gene3D Ribonuclease Inhibitor 209 310 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02494 Aip-Chr4 111401726 111409369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02494 23 732 Receptor kinase-like Gene Family AT5G01950 58.864 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip04g02494 PK_Tyr_Ser-Thr 4.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02494 - - lang:109325183 897.501