Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02479 ATGCTTTGCTTTTCCATGCAGCAAGCTCAAAACTCGCAACTCCAGATCGAATCCAACTTCCCTATATACCCGGAATCGTTCCGTTTTGACTCACCGAGTTGCCTCTTCAAGCTCTCTTCTCACTTCTCATGGCTTAAGCCTGCAGATAACATTCTATTGAGTTGTGGTGGTCCTCAAACTAGTAAAGATTCTGATGGAAGGGTATGGCATAGTGATGTTGGTTCCAAGTTTGCATCATCCAAGGGAAACACCAGCACCTCGCCAGCGGCGACTCAGGACCCTGCTGTCCCTACTGTGCCATACATGAATGCCAGGGTGTTCCATTCGCCTTATACATACTCCTTTCCGGTGGCGTCCGGTTGGAAGTTCCTCCGGCTGTACTTCTACTCGGCGTCCTACAATGGACTCAATGCCAGCGATGCGCTGTTCTCGGTGACTTCGCCGTCCTATACCTTGCTCAGGAACTTCAGTGTGGCGCAAACCACACTGGCTCTGAATTATGTCTACATTGTGAAGGAGTACTGCATCAATGTTGATGGAGATACCTTGAATGTGACTTTCACTCCGTCGACCAACAAGTCGAACGCTTATGCGTTTGTTAATGGGATTGAGGTTGTGTCCATGCCTGATATTTATACTGAAACTGATGGTTCTACCATGATGGTGGGTACGAATTCTCCTATCACTGTTGACAACAGCACTGCACTTGAGACTCTCTATAGGTTGAATGTGGGTGGAAATGATATCTCGCCTTCCCAAGATACTGGTCTGTTTAGGTCTTGGTCTGATGATGTGCCCTACCTATTTGGGGCAGCGTTTGGTGTGACTGAGCCTGCTGATTCGTCAGTCAAGATTCGGTATCCTCCAGGCACACCAAGTTATATTGCTCCACTTGATGTCTACAGTACAGCCAGATCAATGGGGCCAACTCCGAACATCACCATTCAATACAACTTGACTTGGGTTTTCTCTATTGACTCTGGGTTTTCGTATATTGTGAGACTCCATTTTTGTGAGGGAACATCAGTTATAAACAAGGTCAATCAGAGAGTATTTGATATATTCCTCAATAATCAAACTGCTGAGCCCGCAGCTGATGTTATTGCGATTGCACAAGCAGAATATGGAACTTCATATACAAATGGAGTTGCAATTCATAAAGATTTTGCTGTGTTTGTTCCCAATGGAGAGCCACGCCAGGATCTGTGGCTTTCATTACAACCTGATAAAACTATGAAGCCCAACTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAGTGATGCTAATGGTAATCTGGCTGGGACAAATCCTATTCCTCCTCCACTGCAAGACAACATTGACCTGGCTTTGGTTAGGAGTCATCATGCTACATCGAAGAATCATACAGGAATAATTGCAGGAGGTGTTGCTGGAGGAATTGTTGTAGCACTTGTCATTGGACTATTTGCTTTTATTGTATCCCGTCGTCGCAGGCAAGGAAAGGAGCCTAGTTCAAGTGAAGGGCCATCCGGATGGCTTCCACTTTCTTTGTACGGCAATTCGCACTCTGCAGCTTCGGCCAAGACCAACACAACAGGAAGTTATGCGTCCTCTCTGCCATCGAACCTTTGTCGTCACTTCTCATTTGCTGAAATCAAGGCCGCCACGAACAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGTGAAATCGATGGCGGGTCAACCAAAGTAGCAATCAAGCGTGGGAATCCATTGTCTGAGCAAGGAGTGCATGAGTTCCAAACCGAGATTGAAATGCTCTCTAAACTCCGCCACCGCCACCTTGTCTCACTGATTGGTTATTGTGAAGAAAACACTGAAATGATTCTTGTCTATGATTACATGGCCCATGGAACACTCAGGGAGCATCTATACAAGACACAGAAACCTCCATTGCCTTGGAAGCAAAGGCTTGAGATATGCATCGGAGCTGCTCGGGGTTTACACTATCTTCACACTGGTGCCAAACACACTATCATCCACCGTGATGTGAAGACAACAAACATCTTACTTGATGAGAAGTGGGTGGCCAAGGTCTCTGATTTCGGCTTGTCAAAAACCGGCCCAACATTGGATAACACACACGTAAGCACTGTCGTAAAGGGTAGTTTCGGATACTTGGATCCAGAATACTTCAGGAGGCAGCAGCTCACTGACAAATCCGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATACTCTGTGCTCGACCGGCTCTAAACCCGACCCTTGCCAAGGAGCAAGTGAGTCTAGCTGAGTGGGCGGCTCACTGCTACAGAAAAGGCAATCTTGACCAAATTGTGGATCCTTACCTCAAGGGCAAGATAGCTTTTGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCCGACCAAGGTATCGAGCGGCCGTCCATGGGCGATGTCTTGTGGAACCTCGAGTTTGCTTTGCAGCTGCAAGAAAGCGCCGAGGAGAGTGGCAAGGGATTCGCCGGAATACTCAACGAGGAGGAGCCGCTATGCTCGGATCCTAAAGGGAAGAAGGACTCTGATGCATTGCCAATGTATGATGGCAATACTGATTCAAGAAGCAGTGGCATGAGCATGAGCATTGGTGGTAGAAGCTTAGCAAGTGAAGACTCTGATGGATTAACACCAAGTGCTGTTTTCTCTCAGATCATGAATCCAAAGGGTCGTTAA 2742 0.4664 MLCFSMQQAQNSQLQIESNFPIYPESFRFDSPSCLFKLSSHFSWLKPADNILLSCGGPQTSKDSDGRVWHSDVGSKFASSKGNTSTSPAATQDPAVPTVPYMNARVFHSPYTYSFPVASGWKFLRLYFYSASYNGLNASDALFSVTSPSYTLLRNFSVAQTTLALNYVYIVKEYCINVDGDTLNVTFTPSTNKSNAYAFVNGIEVVSMPDIYTETDGSTMMVGTNSPITVDNSTALETLYRLNVGGNDISPSQDTGLFRSWSDDVPYLFGAAFGVTEPADSSVKIRYPPGTPSYIAPLDVYSTARSMGPTPNITIQYNLTWVFSIDSGFSYIVRLHFCEGTSVINKVNQRVFDIFLNNQTAEPAADVIAIAQAEYGTSYTNGVAIHKDFAVFVPNGEPRQDLWLSLQPDKTMKPNYYDAILNGVEIFKISDANGNLAGTNPIPPPLQDNIDLALVRSHHATSKNHTGIIAGGVAGGIVVALVIGLFAFIVSRRRRQGKEPSSSEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYRKGNLDQIVDPYLKGKIAFECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGFAGILNEEEPLCSDPKGKKDSDALPMYDGNTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02479 913 PANTHER OS07G0166700 PROTEIN 34 870 IPR045272 GO:0004714|GO:0006468
Aip04g02479 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Aip04g02479 913 MobiDBLite consensus disorder prediction 851 913 - -
Aip04g02479 913 Gene3D - 51 209 - -
Aip04g02479 913 Gene3D - 234 430 - -
Aip04g02479 913 Gene3D Transferase(Phosphotransferase) domain 1 633 845 - -
Aip04g02479 913 CDD STKc_IRAK 562 828 - -
Aip04g02479 913 Pfam Malectin-like domain 53 429 IPR024788 -
Aip04g02479 913 Pfam Protein tyrosine and serine/threonine kinase 562 823 IPR001245 GO:0004672|GO:0006468
Aip04g02479 913 ProSiteProfiles Protein kinase domain profile. 556 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02479 913 Gene3D Phosphorylase Kinase; domain 1 517 632 - -
Aip04g02479 913 PANTHER - 34 870 - -
Aip04g02479 913 MobiDBLite consensus disorder prediction 854 868 - -
Aip04g02479 913 ProSitePatterns Protein kinases ATP-binding region signature. 562 585 IPR017441 GO:0005524
Aip04g02479 913 SUPERFAMILY Protein kinase-like (PK-like) 530 830 IPR011009 -
Aip04g02479 913 MobiDBLite consensus disorder prediction 871 906 - -
Aip04g02479 913 SMART serkin_6 556 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02479 Aip-Chr4 111076568 111082170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02479 47 913 Receptor kinase-like Gene Family AT3G51550 73.050 0.0 1287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g02479 Malectin_like 2e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02479 - - gmx:100499644 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02479 04 111076568 111082170 Aip04g02479 04 111076568 111082170 ECH