Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02475 ATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATAAACAGAATGAATTCGAACAAGATTTTGGAGATGAATTTACTGAGGGAGCGTATTTTTCTGAATCTGATCAGTCAGAAGATATCCTTGAAGCTGCTTATGCGGTTGACTCCATGCAAGACATTACAACTTTGAAATTTAGTGAAAATTTTGCAGAGAAAATTGGCAAATATCATTTTTCTACTTTGCAGCTTGCATTTGATTTTTATTTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAATTTGTATGTCATAGACAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGAAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCTCGAATGGATGTTAAATTTTGCTATGCTGCCTGCCCACAGAAAAATGTAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTTCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGCTATGCGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTCAGCGGGGTTAACCACCACAACCAAACAATTGTTTTTGCTGCTGCGTTAGTTGTGGACGAAACTACTGATACATATATTTTGCTCCTGTGTCAGCTCATGTTTGCAATGAAGGGCAAGACCCCGACCTCAATAATAACTGATGGGGCCATGGCGATTAGGAATGCAGTAAGAGTTGTATTTTCCGAAGTCAGACATAGATTATGCGCTTAG 1011 0.3996 MNEQYQEDDDFNQQEELVSDQDMMDKQNEFEQDFGDEFTEGAYFSESDQSEDILEAAYAVDSMQDITTLKFSENFAEKIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRQGFREEKYYTMEKRKKEPRLETRTGCEARMDVKFCYAACPQKNVEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGSRDMYNEIARQRRQIPGDAARVLKKLEAMRQLDYRLFGDVIAFDATYKKNKYSCPLVIFSGVNHHNQTIVFAAALVVDETTDTYILLLCQLMFAMKGKTPTSIITDGAMAIRNAVRVVFSEVRHRLCA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02475 336 PANTHER OS02G0262500 PROTEIN 78 160 - -
Aip04g02475 336 PANTHER OS02G0262500 PROTEIN 239 335 - -
Aip04g02475 336 Pfam FAR1 DNA-binding domain 92 160 IPR004330 -
Aip04g02475 336 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 160 IPR031052 GO:0006355
Aip04g02475 336 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g02475 336 Pfam MULE transposase domain 248 335 IPR018289 -
Aip04g02475 336 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 239 335 IPR031052 GO:0006355
Aip04g02475 336 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02475 Aip-Chr4 110976735 110977906 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02475 MULE 2.4e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02475 - K17604 adu:107457868 569.311