Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02465 | ATGTTTATTACGGAGAATATTAGTAATGGTAATAATTTATTGGGTCGTAGGAAGGCAATTGAGGAGCTTGAGAAGGGTCGTGAATTTGCAAACAAGCTTAGGGTTGTGATCAATGGTGGTGATGGTGGTGTTGATGGTGAACAACTTGTGGAGAAGGTTCTTATGTCATTCACAAACTCACTCTTGATCTTGAACAAGAACCCTAGTTCTAATAATTGTGATGAGGTCTGTGATGTTCCTTCTTCATGTGGGATCAATCCAACCAAGTCTGAGGATTCACTTGAGAGTAATTGCAAGAGCTCCGTTCATAAAGAACGTAGAGGATGTTACAAGAGAAGAAGGACTTCACAAGTATTGGAGAAGGAGTCTGAAGCTCCAATTGATGATGGTCATCAGTGGAGAAAATATGGCCAAAAGGTTATCCTTAATACCAAACATCCAAGGAACTATTACAGATGCACTCACAAATATGACCAAGGTTGTCTAGCAACAAAACAAGTGCAACAAGTTGAAGATGAACCAACACTTTACAAGACCACATACTATGGAAACCACACTTGTAGGAACACCCTGAACCCTACAATCATATTGGATGATTCCAATGATTCTCCTTCACAATCTTCAATGTTCCTCAGCTTTGATAATTCCCTCCCAACAAAACAAGAATGTCCTATTTTCCTCTCATCATCATCTTTAGTAATCAAGAAGGAAGAGGAGTTCAAGGAGGAGGACCTTAATAATAATAATAATAATGTTCCTTCATGTTCTTCAAATGATTACATGATATCTTCGGAGCTTACTTTTGATAACTACTCAACGCATCATCATGTTAATGCTTTATCATCAACACTTGACTCAGATGATGTTATTTCTTATGATCCTTCTCACTTTGATGATGCCATTGAGTTTCTTTGTTATTAA | 921 | 0.3757 | MFITENISNGNNLLGRRKAIEELEKGREFANKLRVVINGGDGGVDGEQLVEKVLMSFTNSLLILNKNPSSNNCDEVCDVPSSCGINPTKSEDSLESNCKSSVHKERRGCYKRRRTSQVLEKESEAPIDDGHQWRKYGQKVILNTKHPRNYYRCTHKYDQGCLATKQVQQVEDEPTLYKTTYYGNHTCRNTLNPTIILDDSNDSPSQSSMFLSFDNSLPTKQECPIFLSSSSLVIKKEEEFKEEDLNNNNNNVPSCSSNDYMISSELTFDNYSTHHHVNALSSTLDSDDVISYDPSHFDDAIEFLCY | 306 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02465 | 306 | ProSiteProfiles | WRKY domain profile. | 122 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g02465 | 306 | PANTHER | WRKY TRANSCRIPTION FACTOR 70-RELATED | 13 | 278 | - | - | |
Aip04g02465 | 306 | SUPERFAMILY | WRKY DNA-binding domain | 125 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g02465 | 306 | SMART | WRKY_cls | 127 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g02465 | 306 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 13 | 278 | IPR044810 | GO:0003700 | |
Aip04g02465 | 306 | Pfam | WRKY DNA -binding domain | 128 | 188 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g02465 | 306 | Gene3D | WRKY domain | 112 | 189 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02465 | Aip-Chr4 | 110730298 | 110735285 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02465 | 12 | 187 | WRKY Transcription Factor Family | AT3G56400 | 41.111 | 2.22e-37 | 133 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aip04g02465 | WRKY | 3.2e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02465 | - | - | ahf:112797210 | 557.37 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g02465 | 04 | 110730298 | 110735285 | Aip04g02465 | 04 | 110730298 | 110735285 | ECH | |
Aip04g02465 | 04 | 110730298 | 110735285 | Aip02g00616 | 02 | 9280686 | 9282262 | PCT |