Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02465 ATGTTTATTACGGAGAATATTAGTAATGGTAATAATTTATTGGGTCGTAGGAAGGCAATTGAGGAGCTTGAGAAGGGTCGTGAATTTGCAAACAAGCTTAGGGTTGTGATCAATGGTGGTGATGGTGGTGTTGATGGTGAACAACTTGTGGAGAAGGTTCTTATGTCATTCACAAACTCACTCTTGATCTTGAACAAGAACCCTAGTTCTAATAATTGTGATGAGGTCTGTGATGTTCCTTCTTCATGTGGGATCAATCCAACCAAGTCTGAGGATTCACTTGAGAGTAATTGCAAGAGCTCCGTTCATAAAGAACGTAGAGGATGTTACAAGAGAAGAAGGACTTCACAAGTATTGGAGAAGGAGTCTGAAGCTCCAATTGATGATGGTCATCAGTGGAGAAAATATGGCCAAAAGGTTATCCTTAATACCAAACATCCAAGGAACTATTACAGATGCACTCACAAATATGACCAAGGTTGTCTAGCAACAAAACAAGTGCAACAAGTTGAAGATGAACCAACACTTTACAAGACCACATACTATGGAAACCACACTTGTAGGAACACCCTGAACCCTACAATCATATTGGATGATTCCAATGATTCTCCTTCACAATCTTCAATGTTCCTCAGCTTTGATAATTCCCTCCCAACAAAACAAGAATGTCCTATTTTCCTCTCATCATCATCTTTAGTAATCAAGAAGGAAGAGGAGTTCAAGGAGGAGGACCTTAATAATAATAATAATAATGTTCCTTCATGTTCTTCAAATGATTACATGATATCTTCGGAGCTTACTTTTGATAACTACTCAACGCATCATCATGTTAATGCTTTATCATCAACACTTGACTCAGATGATGTTATTTCTTATGATCCTTCTCACTTTGATGATGCCATTGAGTTTCTTTGTTATTAA 921 0.3757 MFITENISNGNNLLGRRKAIEELEKGREFANKLRVVINGGDGGVDGEQLVEKVLMSFTNSLLILNKNPSSNNCDEVCDVPSSCGINPTKSEDSLESNCKSSVHKERRGCYKRRRTSQVLEKESEAPIDDGHQWRKYGQKVILNTKHPRNYYRCTHKYDQGCLATKQVQQVEDEPTLYKTTYYGNHTCRNTLNPTIILDDSNDSPSQSSMFLSFDNSLPTKQECPIFLSSSSLVIKKEEEFKEEDLNNNNNNVPSCSSNDYMISSELTFDNYSTHHHVNALSSTLDSDDVISYDPSHFDDAIEFLCY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02465 306 ProSiteProfiles WRKY domain profile. 122 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02465 306 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 13 278 - -
Aip04g02465 306 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g02465 306 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02465 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 278 IPR044810 GO:0003700
Aip04g02465 306 Pfam WRKY DNA -binding domain 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02465 306 Gene3D WRKY domain 112 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02465 Aip-Chr4 110730298 110735285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02465 12 187 WRKY Transcription Factor Family AT3G56400 41.111 2.22e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip04g02465 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02465 - - ahf:112797210 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02465 04 110730298 110735285 Aip04g02465 04 110730298 110735285 ECH
Aip04g02465 04 110730298 110735285 Aip02g00616 02 9280686 9282262 PCT