Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02442 ATGGCCACTCTAAAAGATCATGTAGAGACTAATGCAGCATTAAAGGATCAGTCCAAGAAAGAACAAGAGGAAGATCCAGAGGTGGTTTTGGACCTGTGTTTAAGGAACATTAGAAAATGGGCAAAGAATTGCAAAGGCTTAGGGTGTTCGTTAGTGGGTACCTTCTTGAAATCACTTGTGAATGCATCCCTGGTTGCCAAGAAGTTAAATTTTGCAACTGAGAAACAAAGAAGAGAGCAATTGAATGGCAAATACAAAATACTGAGAAGTCTTTTCCCAAGCCCCACAAAGattattgataacttggaacaaagattttacaagaatttacatcaagcgtcgccctga 348 0.3362 MATLKDHVETNAALKDQSKKEQEEDPEVVLDLCLRNIRKWAKNCKGLGCSLVGTFLKSLVNASLVAKKLNFATEKQRREQLNGKYKILRSLFPSPTKIIDNLEQRFYKNLHQASP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02442 115 Coils Coil 4 24 - -
Aip04g02442 115 MobiDBLite consensus disorder prediction 1 25 - -
Aip04g02442 115 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 96 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02442 Aip-Chr4 110278478 110281502 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip04g02442 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02442 - - aip:107635253 56.9954