Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02435 ATGGGGTGTTTTACTGTTTTGAAAAGCAAGAAGAAAAAGCATGACCAAATTGCATATGTAAAACGAGTAAGCCACAGTGAGCATGTACCTACAATATTGCCTGAACCTCATACTCGCACGCTCCAATCTGCACCTCCTAGTTTTAGGACAAGAGTTAAACCCATTCAACCTAGTAAAATGACTTACAATAGAACAAGAGCATTATCTGCTCCATCAACTCTTGACACAGCGGAACAAGATGCTTTAGCTTCGGTTGAGTATGAGGAACAAGAAGAGTTGAGACACCGAGGAGGAGGATCAATGAAGGAGCAGCATTTGTCTAGCCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGCAGTTCATTGAACGCAATGGGCAGCTTTAAGTCAGTGACAGCTAATGTTCCTCCAAATTCTTCTGGACCTTTGCCGCTTCCACCTACAGGGTCACTTCGAAACTTTCAGTATGAGGAAATTGCAGCTGCTTGCCTCAATTTCTCCTTAGATCGATGCATGTCGGAATGCCTTTCCTCCACCATATATAAAGCTTCCTTTGGCGATGATTCTTCTTCAAGCTCAAAGAAGTTTGAAGCCACTGTCACGCGTCTACACCCATCAAATCAGGGCTTAAAGGAATTCATAAGTGAGGTCAATACTATAGCATCTTTGCAGCATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCGCGTGAAGGTAAGGAACAAAGAATGCTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTACGTGAGATCTGATGGCCCGTCTCTTGATTGGAACACAAGAATGAAAATCGCTATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCTAACATACAGATAGACAAAGATTTCAGTGCCAAGCTTTCAGGGTACGGTTGCGTTGGACAACTTCCCGAGGAAGAGATATCGAGCAGTTCATCCGCTGTTGGCAACCTATCAATGGAGACACTGGAAAAAGGAATGCTCACACCAAAAAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTTCTTACTGGAAGAAAGAATCTGGATAGTCGTCACCCCAAGGAAGAGAGAAATTTGGTCAAGTGGAGCCGTCCCTTCCTAGCCGATGATTATCGACTCTCATTGATTATGGATCCTCAACTGAAGGGTCGCTTTCCCTCCAAAGCGGCGAGAACTGTAGCTGACATTGCCCAAAGATGCCTTCAGAAGGAGCCGTCCGAAAGACCAACCATGAGGACTGTTGTCAAGCACCTCAAAATGATACAGGATTTAAAGTATTCTTGCCGGTTCCCGCTTCAAGAACCAGCCACAATCTCCGGAAAACATATGTCGAGATCCCCAAGTCTTAACGGCATCATCAGCCCTGCTCCTAGGCTGAGTTACTCCCCGTCTCCCCCACCAACAGTGGCCCCGCCATCTGTTTCACCTCCAAGATGGTCCGGAGTCCCGTTCCTTCCTCCGCGTGCGTGTTCCTCTACCCTCTCCCTGGAGGAGCTCGATAGGCAGGAGAGCCGCAAGTCGTCGTCCTCGGCCTCTAGGAGGGCTAGTGTGGAAGGTTTTTGA 1638 0.467 MGCFTVLKSKKKKHDQIAYVKRVSHSEHVPTILPEPHTRTLQSAPPSFRTRVKPIQPSKMTYNRTRALSAPSTLDTAEQDALASVEYEEQEELRHRGGGSMKEQHLSSPQPLPLPSPKGGSSLNAMGSFKSVTANVPPNSSGPLPLPPTGSLRNFQYEEIAAACLNFSLDRCMSECLSSTIYKASFGDDSSSSSKKFEATVTRLHPSNQGLKEFISEVNTIASLQHPNLCKLLGFHAREGKEQRMLVYERLYHGSLDRLLYVRSDGPSLDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGQLPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLQEPATISGKHMSRSPSLNGIISPAPRLSYSPSPPPTVAPPSVSPPRWSGVPFLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGF 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02435 545 ProSiteProfiles Protein kinase domain profile. 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02435 545 Gene3D Transferase(Phosphotransferase) domain 1 251 455 - -
Aip04g02435 545 Gene3D Phosphorylase Kinase; domain 1 147 249 - -
Aip04g02435 545 SUPERFAMILY Protein kinase-like (PK-like) 142 455 IPR011009 -
Aip04g02435 545 MobiDBLite consensus disorder prediction 464 482 - -
Aip04g02435 545 Pfam Protein tyrosine and serine/threonine kinase 179 443 IPR001245 GO:0004672|GO:0006468
Aip04g02435 545 MobiDBLite consensus disorder prediction 121 139 - -
Aip04g02435 545 MobiDBLite consensus disorder prediction 463 545 - -
Aip04g02435 545 MobiDBLite consensus disorder prediction 87 101 - -
Aip04g02435 545 MobiDBLite consensus disorder prediction 86 142 - -
Aip04g02435 545 PANTHER OS01G0822200 PROTEIN 42 544 - -
Aip04g02435 545 PANTHER OS01G0588500 PROTEIN-RELATED 42 544 - -
Aip04g02435 545 MobiDBLite consensus disorder prediction 484 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02435 Aip-Chr4 110159246 110163469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02435 146 447 Receptor kinase-like Gene Family AT4G02010 37.299 7.65e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Aip04g02435 PK_Tyr_Ser-Thr 4.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02435 - - gmx:100808712 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02435 04 110159246 110163469 Aip04g02435 04 110159246 110163469 ECH