Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02435 | ATGGGGTGTTTTACTGTTTTGAAAAGCAAGAAGAAAAAGCATGACCAAATTGCATATGTAAAACGAGTAAGCCACAGTGAGCATGTACCTACAATATTGCCTGAACCTCATACTCGCACGCTCCAATCTGCACCTCCTAGTTTTAGGACAAGAGTTAAACCCATTCAACCTAGTAAAATGACTTACAATAGAACAAGAGCATTATCTGCTCCATCAACTCTTGACACAGCGGAACAAGATGCTTTAGCTTCGGTTGAGTATGAGGAACAAGAAGAGTTGAGACACCGAGGAGGAGGATCAATGAAGGAGCAGCATTTGTCTAGCCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGCAGTTCATTGAACGCAATGGGCAGCTTTAAGTCAGTGACAGCTAATGTTCCTCCAAATTCTTCTGGACCTTTGCCGCTTCCACCTACAGGGTCACTTCGAAACTTTCAGTATGAGGAAATTGCAGCTGCTTGCCTCAATTTCTCCTTAGATCGATGCATGTCGGAATGCCTTTCCTCCACCATATATAAAGCTTCCTTTGGCGATGATTCTTCTTCAAGCTCAAAGAAGTTTGAAGCCACTGTCACGCGTCTACACCCATCAAATCAGGGCTTAAAGGAATTCATAAGTGAGGTCAATACTATAGCATCTTTGCAGCATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCGCGTGAAGGTAAGGAACAAAGAATGCTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTACGTGAGATCTGATGGCCCGTCTCTTGATTGGAACACAAGAATGAAAATCGCTATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCTAACATACAGATAGACAAAGATTTCAGTGCCAAGCTTTCAGGGTACGGTTGCGTTGGACAACTTCCCGAGGAAGAGATATCGAGCAGTTCATCCGCTGTTGGCAACCTATCAATGGAGACACTGGAAAAAGGAATGCTCACACCAAAAAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTTCTTACTGGAAGAAAGAATCTGGATAGTCGTCACCCCAAGGAAGAGAGAAATTTGGTCAAGTGGAGCCGTCCCTTCCTAGCCGATGATTATCGACTCTCATTGATTATGGATCCTCAACTGAAGGGTCGCTTTCCCTCCAAAGCGGCGAGAACTGTAGCTGACATTGCCCAAAGATGCCTTCAGAAGGAGCCGTCCGAAAGACCAACCATGAGGACTGTTGTCAAGCACCTCAAAATGATACAGGATTTAAAGTATTCTTGCCGGTTCCCGCTTCAAGAACCAGCCACAATCTCCGGAAAACATATGTCGAGATCCCCAAGTCTTAACGGCATCATCAGCCCTGCTCCTAGGCTGAGTTACTCCCCGTCTCCCCCACCAACAGTGGCCCCGCCATCTGTTTCACCTCCAAGATGGTCCGGAGTCCCGTTCCTTCCTCCGCGTGCGTGTTCCTCTACCCTCTCCCTGGAGGAGCTCGATAGGCAGGAGAGCCGCAAGTCGTCGTCCTCGGCCTCTAGGAGGGCTAGTGTGGAAGGTTTTTGA | 1638 | 0.467 | MGCFTVLKSKKKKHDQIAYVKRVSHSEHVPTILPEPHTRTLQSAPPSFRTRVKPIQPSKMTYNRTRALSAPSTLDTAEQDALASVEYEEQEELRHRGGGSMKEQHLSSPQPLPLPSPKGGSSLNAMGSFKSVTANVPPNSSGPLPLPPTGSLRNFQYEEIAAACLNFSLDRCMSECLSSTIYKASFGDDSSSSSKKFEATVTRLHPSNQGLKEFISEVNTIASLQHPNLCKLLGFHAREGKEQRMLVYERLYHGSLDRLLYVRSDGPSLDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGQLPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLQEPATISGKHMSRSPSLNGIISPAPRLSYSPSPPPTVAPPSVSPPRWSGVPFLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGF | 545 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02435 | 545 | ProSiteProfiles | Protein kinase domain profile. | 167 | 445 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g02435 | 545 | Gene3D | Transferase(Phosphotransferase) domain 1 | 251 | 455 | - | - | |
Aip04g02435 | 545 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 249 | - | - | |
Aip04g02435 | 545 | SUPERFAMILY | Protein kinase-like (PK-like) | 142 | 455 | IPR011009 | - | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 464 | 482 | - | - | |
Aip04g02435 | 545 | Pfam | Protein tyrosine and serine/threonine kinase | 179 | 443 | IPR001245 | GO:0004672|GO:0006468 | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 121 | 139 | - | - | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 463 | 545 | - | - | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 86 | 142 | - | - | |
Aip04g02435 | 545 | PANTHER | OS01G0822200 PROTEIN | 42 | 544 | - | - | |
Aip04g02435 | 545 | PANTHER | OS01G0588500 PROTEIN-RELATED | 42 | 544 | - | - | |
Aip04g02435 | 545 | MobiDBLite | consensus disorder prediction | 484 | 508 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02435 | Aip-Chr4 | 110159246 | 110163469 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02435 | 146 | 447 | Receptor kinase-like Gene Family | AT4G02010 | 37.299 | 7.65e-58 | 203 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-II | Aip04g02435 | PK_Tyr_Ser-Thr | 4.7e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02435 | - | - | gmx:100808712 | 884.789 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g02435 | 04 | 110159246 | 110163469 | Aip04g02435 | 04 | 110159246 | 110163469 | ECH |