Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02427 ATGAATAAGGGGAGATATGGAGAGTGCAATGGTAATTGTGGTGATGGAGTTAAGAAGCAGGCTCATCAGTTTGGATATGTTGAAACTGATCCTTCTGGAAGATATGGTCGTTTGAAGGAAGTGCTAGGGAAAGGAGCAATGAAAAGAGTGTATAGAGCATTTGATGAGTACCTTGGAATAGAAGTGGCATGGAACCAAGTGCACCTTGGAGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTCCTCAAGCACCTCACCCACAAATCAATGATGATCTTCTATGGTTCTTGGATTGATCTCAATCGCAAAACCTTCAACTTCATCACCGAATTGTTCACTTCCGGTACCCTTAGAGAGTATAGGCACAAGTATAGAAGAGTAGAAATGAGAGTGCTCAAGAATTGGGCACGCCAGATTCTGAGTGGATTGGAGTATTTGCACAGCAACAACCCACCTGTCATCCATAGAGACCTCAAATGTGACAATATCTTTGTCAATGGCCATTTGGGCCAAGTCAAAATTGGTGACTTAGGCCTTGCAGCTCTACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAGAGTACAATGAGCTTGTAGACATATACTCATTTGGGATGTGCATGATTGAGATGCTTACTTTTGAGTTCCCATATAGTGAATGCTTCAACCCTGCTCAAATATACAAGAAAGTTATTTCGGGTAAGCTACCAAATGCATATTACAAGATCAAAGATTTTGAAGCCCAAAGATTTGTGGGGAAATGTTTGGCACATGTGTCAAAGAGGCCATCAGCAAAGGAGCTATTGTTGGACCCATTTTTGGCCATTGATGATCCAATTGCATCACCATTAGTGCCAATCACAAAACTACCCACAAATCAAGCTTTGAAGCTTAATTCAACTGTAGAAGTTGCGAAGAGCACAGACATGACCATCACCGGGTCAATGAATGAGGTGGACATCAACACTGTTTTTCTTAAAGTCAAGATTTCTGACGCTAATGGGCATACAAGAAACGTGTTCTTTCCATTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAAATGGTAAAGGAACTTGAAATCAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAAGTATCAGCTTTAGTTCCAACTTGGAGGGACCCTTCTTGTTTTCATCAACAACACCAAAGACAGGATAGCTTTAACTATGAAGAAGAAGATGAAGACATAAATAACCATCATCCTTTCTTCTTACCATCATCATCATCATCGTCGTCGTCATCATCAACAACTCCATCTTCTGGCTCACTCAACATGTCTTGTTCCTCATACAAGACCCGTTTTAATAATAATGGGAATAATTGTCCCTCTGCTCCGGATCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCTCTAAGCTCAATGAACTCCATCAAATGTTCCAATGTTCAATACTGTGACAACTCATCATCAAGAAATGAAGAAGAAAATGAGAATAATAATAATGTACCAACAACAACAAAAGTGTTGAAGGGCCATTTTGATGAAGGGCTATTTGAAGAAGCTAGTTACACCAATAAACAACTTTGCAACCCAAGAATGGGGAACACTCACAATAATAAAAATCATTGCATGTGTAATAATAATGGTCATGGACATGGATGGCCTAGACTAACGAGGATTCAATCTTGCGTGGAAGAGAGGAGAACCCAACATCTTCAACGTTTGATTATGTTGGAGGAGATGTGCAACTTCAAGAATAACACTGTTGGAACCATGGAGAACATTGGGTTTTTGAACCTGGAAAGAGGTCGCAGATGCTTTGGTACTCGTTGA 1917 0.4064 MNKGRYGECNGNCGDGVKKQAHQFGYVETDPSGRYGRLKEVLGKGAMKRVYRAFDEYLGIEVAWNQVHLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNRKTFNFITELFTSGTLREYRHKYRRVEMRVLKNWARQILSGLEYLHSNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAALLLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFEFPYSECFNPAQIYKKVISGKLPNAYYKIKDFEAQRFVGKCLAHVSKRPSAKELLLDPFLAIDDPIASPLVPITKLPTNQALKLNSTVEVAKSTDMTITGSMNEVDINTVFLKVKISDANGHTRNVFFPFDTIKDTAMEVAMEMVKELEISHLEPLEIAAMIDHEVSALVPTWRDPSCFHQQHQRQDSFNYEEEDEDINNHHPFFLPSSSSSSSSSSTTPSSGSLNMSCSSYKTRFNNNGNNCPSAPDQWPQEDPLSMNDDASSLSSMNSIKCSNVQYCDNSSSRNEEENENNNNVPTTTKVLKGHFDEGLFEEASYTNKQLCNPRMGNTHNNKNHCMCNNNGHGHGWPRLTRIQSCVEERRTQHLQRLIMLEEMCNFKNNTVGTMENIGFLNLERGRRCFGTR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02427 638 MobiDBLite consensus disorder prediction 420 435 - -
Aip04g02427 638 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 626 - -
Aip04g02427 638 Gene3D Phosphorylase Kinase; domain 1 20 117 - -
Aip04g02427 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Aip04g02427 638 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
Aip04g02427 638 MobiDBLite consensus disorder prediction 418 458 - -
Aip04g02427 638 MobiDBLite consensus disorder prediction 474 499 - -
Aip04g02427 638 PANTHER WNK KINASE 14 626 - -
Aip04g02427 638 MobiDBLite consensus disorder prediction 437 458 - -
Aip04g02427 638 ProSiteProfiles Protein kinase domain profile. 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02427 638 Pfam Protein kinase domain 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02427 638 SMART serkin_6 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02427 638 SUPERFAMILY Protein kinase-like (PK-like) 38 462 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02427 Aip-Chr4 109838250 109843098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02427 24 431 MAP Kinase Kinase Kinase AT3G51630 64.916 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip04g02427 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02427 K08867 - gmx:100272206 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02427 04 109838250 109843098 Aip04g02427 04 109838250 109843098 ECH
Aip04g02427 04 109838250 109843098 Aip02g02474 02 98591512 98598297 PCT