Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02424 ATGTATGCTGAGAAAGAACCTGAGTTTAAGGTCCTAAAAGAGACAAGGATTTTCTCAAGGGGAATCTCACATAAGTGGAGCAAAACAAGAAAGCAAAAGTCACCAACTCCTCCTCTTCCTCATCCTCCATCCAACAAGAAAACCCAACCTTCTTCATCAAAACCAAAGCAGCAATTCAACAACACCACCACTCCAAGAAAGTCCTATTACTTTACAAGACAACACACCACTTCCCCTCAACAACAACCAAGAAAATCATCATCAAAACAGAGACCAACAATAAAGACTAGTAGAAGAACAACTACTCCAAGACTTTCTTCTTCTTCTTCTTCTTCTAAGTTTCTTGTTATCAATGTGACGCCTACCATTAACACTACTACCTCCGATGGTGAATCAGAGTTCCAAGCAGAGCCAGAATTCAGAACAGACCGTGTTCTTCACACCGACTCTAATTCTAATTCCTCCTCGCTTGATGACATCATCATTGACGTCGACAACAACTCCATTTCCACAACAAAATCTGACATTAACAACAAACATCTTCCTCTTCCTCCAATTCTCACCAAACCAAAGAACCAACAAGAATCTAGAAACAAGAACAAGAACGCCACCACCCCGTGTTCTAGAAGATTCTCCGTTAGCTCAGCCGCAGGGGCCAGGAGGCTTAGGATCAATTCTCCCAGAGTTTCCGGAGCAAGTTTCCGGAAACTCCATCATCAGGCGGACGCATCACACGGCCAAAGAAGCACTACTTCTTCGGCCGTTATTGACGCGTCCGCCGGACAAGGGAGGAGCGTTTCGGGAAGCTTTGCGATAGTAAAGTCATCGTTGAATCCGCAGAGAGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGAGTTCGAAGGATTTGGAGGATCTTCTTGCTTGTTACCTAACTCTGAATTCAGATGAGTATCATGGCTTAATCATCAACCATCTGTGTTATGTTAACAATGGAAAGAGAGAAGAAGAGTGCATATATATACATGAAGAAGAGAAGCTCGCGCTGGTTCCTGGAGTGGGGGCTGTCCCCTGCATGCAGGCAAGGCTGCAACACGCCCCCCGCGTGGTGCTGCAGCAGGCATTGAAACTCTGCGAACTTCTGCTGCGCTTCACGGGTCTCCAGGTACCACGCCTCCGGCGTGGTGAGTTAGCACGCCACTGGCGTGTTGGAGGAGTGCCGCCACGTCGCTTACCTGCTTAG 1239 0.4665 MYAEKEPEFKVLKETRIFSRGISHKWSKTRKQKSPTPPLPHPPSNKKTQPSSSKPKQQFNNTTTPRKSYYFTRQHTTSPQQQPRKSSSKQRPTIKTSRRTTTPRLSSSSSSSKFLVINVTPTINTTTSDGESEFQAEPEFRTDRVLHTDSNSNSSSLDDIIIDVDNNSISTTKSDINNKHLPLPPILTKPKNQQESRNKNKNATTPCSRRFSVSSAAGARRLRINSPRVSGASFRKLHHQADASHGQRSTTSSAVIDASAGQGRSVSGSFAIVKSSLNPQRDFRESMVEMIVQNNIRSSKDLEDLLACYLTLNSDEYHGLIINHLCYVNNGKREEECIYIHEEEKLALVPGVGAVPCMQARLQHAPRVVLQQALKLCELLLRFTGLQVPRLRRGELARHWRVGGVPPRRLPA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02424 412 MobiDBLite consensus disorder prediction 172 216 - -
Aip04g02424 412 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 20 323 - -
Aip04g02424 412 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 20 323 IPR038933 GO:0045892
Aip04g02424 412 MobiDBLite consensus disorder prediction 1 21 - -
Aip04g02424 412 MobiDBLite consensus disorder prediction 189 212 - -
Aip04g02424 412 ProSiteProfiles OVATE domain profile. 272 331 IPR006458 -
Aip04g02424 412 MobiDBLite consensus disorder prediction 1 113 - -
Aip04g02424 412 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 271 323 IPR006458 -
Aip04g02424 412 MobiDBLite consensus disorder prediction 46 113 - -
Aip04g02424 412 Pfam Transcriptional repressor, ovate 276 323 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02424 Aip-Chr4 109716070 109722541 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip04g02424 Ovate 2.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02424 - - adu:107485240 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02424 04 109716070 109722541 Aip04g02424 04 109716070 109722541 ECH