Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02411 | ATGAGCTACTCCAAAAACGACGCCGTCGTGGAAACCGAGCCAACGACACCGCCAACACAAAACGACAGCACCGTTTTGTTCGGCAAGTACGAGCTCGGCGAACTTCTGGGCGTAGGCGCGTCCGCTAAAGTATACCACGCGACGCGCGTGGCCGACGGTGGAAGCGTGGCAGTTAAGGCCGTTAGCAAACGCAACATCGCTTCCAACTGCCATGCAGCTAACGTGGAGCGCGAGATCTCCGTCACGCGCCGCCTCCGCCACCACCCAAACATCATCAACCTCCTTGAGGTCCTCGCCACCAAGACCAAAATCTACCTTGTCATGGAGTTCGCCGCCGGCGGAGAACTTTTCCAGAAGGTCGCCCACGGCGGCCGCTTGACGGATGACGTCGCCAGAAAATATTTCCGGCAGCTCATCTCCGCCGTAAAGCACTGCCACTCCGCCGGCGTCTACCACCGTGATCTCAAGCTCGACAACCTCCTCCTTGACGATGACGGCAACCTTCAAGTCTCCGATTTCGGGTTGAGCGCCGTGAAGAACCAGATCCGACCCGATGGCTTGCTCCACACAGTTTGTGGGACCCCTGCTTACGTGGCACCTGAGATCTTGGCCAAGAAGGGATATAATGGCGCCACGGTGGACGTGTGGTCCTGCGGCGTCGTTTTGTTTGCATTGACCGCGGGTTTTTTACCCTTCAATGATTACAATATTACAGTTTTGTACAGGAAGATTTACCGCGGTCAATTTCGGTTTCCAAAGTGGATATCTTGTGGATTAAGAAACCTTATATCGCGGTTGTTGGATGTAAATCCAGAAACGCGAATTACCGTTGACGAGATTATGCAAGACCCGTGGTTTAATTCGGGTGGGTATAAACTTAATCGGGTTCTTGTTGAAGAACCCGAATGGGAGAAGAGTCAAATAAAAATTAAAACGTTAAATGCATTTGACTTGATATCTTTTTCGACTGGGTTGGACATGTCGGGTCTATTTGTGAATAACGGTGTTCTGAATCATGTGGAGCGATTTGTCCTGAGAGAGAAAGTAGAGAGGATACTAGAGAAGGTGGATGAGGTGGCTAAGGGGACCAATTTAACAGTGACAAGGAATGAGAAATGTGAAGGTGCAAGGTTGGAAGGGCAAGATGGTAATTTAGTTGCCCTTGTGTTGGTTTACCGGTTAACGGATGAGTTGGTGGTGGTTGAAGTCAAGAGTATTGGAAAGATGAATTGCAACCCCAACTTTATGAGTTGCCTCATGGATAACGGGCATAACTCTTTAGAATTTTAG | 1290 | 0.5008 | MSYSKNDAVVETEPTTPPTQNDSTVLFGKYELGELLGVGASAKVYHATRVADGGSVAVKAVSKRNIASNCHAANVEREISVTRRLRHHPNIINLLEVLATKTKIYLVMEFAAGGELFQKVAHGGRLTDDVARKYFRQLISAVKHCHSAGVYHRDLKLDNLLLDDDGNLQVSDFGLSAVKNQIRPDGLLHTVCGTPAYVAPEILAKKGYNGATVDVWSCGVVLFALTAGFLPFNDYNITVLYRKIYRGQFRFPKWISCGLRNLISRLLDVNPETRITVDEIMQDPWFNSGGYKLNRVLVEEPEWEKSQIKIKTLNAFDLISFSTGLDMSGLFVNNGVLNHVERFVLREKVERILEKVDEVAKGTNLTVTRNEKCEGARLEGQDGNLVALVLVYRLTDELVVVEVKSIGKMNCNPNFMSCLMDNGHNSLEF | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02411 | 429 | Pfam | NAF domain | 311 | 368 | IPR004041 | GO:0007165 | |
Aip04g02411 | 429 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Aip04g02411 | 429 | SUPERFAMILY | Protein kinase-like (PK-like) | 26 | 319 | IPR011009 | - | |
Aip04g02411 | 429 | Pfam | Protein kinase domain | 30 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g02411 | 429 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 | 15 | 406 | - | - | |
Aip04g02411 | 429 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 115 | - | - | |
Aip04g02411 | 429 | ProSiteProfiles | NAF domain profile. | 308 | 332 | IPR018451 | GO:0007165 | |
Aip04g02411 | 429 | Gene3D | Kinase associated domain 1, KA1 | 308 | 421 | - | - | |
Aip04g02411 | 429 | PANTHER | - | 15 | 406 | - | - | |
Aip04g02411 | 429 | ProSiteProfiles | Protein kinase domain profile. | 30 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g02411 | 429 | SMART | serkin_6 | 30 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g02411 | 429 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 290 | - | - | |
Aip04g02411 | 429 | CDD | CIPK_C | 314 | 404 | - | - | |
Aip04g02411 | 429 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 150 | 162 | IPR008271 | GO:0004672|GO:0006468 | |
Aip04g02411 | 429 | ProSitePatterns | Protein kinases ATP-binding region signature. | 36 | 59 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02411 | Aip-Chr4 | 109425225 | 109426878 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02411 | 19 | 407 | CBL-interacting serine-threonine protein kinases | AT2G30360 | 55.190 | 2.17e-155 | 445 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Aip04g02411 | Pkinase | 6.1e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02411 | - | K12761 | gmx:100788245 | 509.605 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g02411 | 04 | 109425225 | 109426878 | Aip04g02411 | 04 | 109425225 | 109426878 | ECH |