Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02407 ATGGCTCCAAAGAAAGATAAGGCTCCTCCACCATCTTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACCAGGTGCTGTTTGATCAGGCTTCATATGACAAGCTCCTCTCTGAAGCACCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTCTGAGGATTAATGGGTCACTTGCAAGGAAGGCGATAAGAGAGTTGATGGCTAGAGGTTCGATCCGGCTGGTGTCCGCTCACGCGAGTCAGCAGATTTACACTAGGGCAACAAACACCTAG 327 0.5015 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQASYDKLLSEAPKFKLITPSILSDRLRINGSLARKAIRELMARGSIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02407 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Aip04g02407 108 Gene3D - 21 108 - -
Aip04g02407 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Aip04g02407 108 MobiDBLite consensus disorder prediction 1 36 - -
Aip04g02407 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02407 Aip-Chr4 109254254 109256257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02407 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.589 9.74e-55 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02407 K02975 - gmx:548053 157.147