Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02374 ATGTCAGATATATTTACGGACATTGAGATGGATAAGCAATACGAGGAGGACGATGACATTAACCAACAAGAAGAGCTAGTTTGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATGAATTTACTGAGGGAGCATATTTTTCTGAATCTGATCAGTCAGAAAATACCCTTGAAGCTGCTTATGTGGTTGACTCTGTGCAAGACATTACAACTTTGAATTTCAGTGAAAATTGTGCGGAAGAAATTGGTAAATATCACTTTTCTACTTTGCAGCTTGTATTTGATTTTTATCTGAAGTACTCAAAGTCGAAAGGTTTTAGTGCAAGGAAGAGTCAGACTTTCAAGAATAGTATTGGCGAGATTTACAAACCAAAGTTTGTATGTCATAGGCAAGGATTCAGGGAGGAGAATTATTACACGATCGAAAAAAGGAAGAAGGAGCCTAGATTGGAAATAAGAACTGGGTGTGAAGCCCGAATGGATATTAAATTTGTACTAGAAACTGGAAGATGGCATATCTTTTATTTCTCTTACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAAAAAATGTCAGAGGTAG 624 0.3702 MSDIFTDIEMDKQYEEDDDINQQEELVCDQDMMDEQNEFEQDFGDEFTEGAYFSESDQSENTLEAAYVVDSVQDITTLNFSENCAEEIGKYHFSTLQLVFDFYLKYSKSKGFSARKSQTFKNSIGEIYKPKFVCHRQGFREENYYTIEKRKKEPRLEIRTGCEARMDIKFVLETGRWHIFYFSYEHNHDLLDTQFSAMLPAHKKCQR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02374 207 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Aip04g02374 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 199 - -
Aip04g02374 207 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02374 Aip-Chr4 108169533 108170156 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02374 FAR1 2.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02374 - - aip:107607217 366.311