Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02362 ATGATCAAGAAGAACAATAGTGCTGAAGAAGAACAACGTGATCTGAATGAAACTGCGATTGAGATCTTGTTTCAACTTGATCTCTCAGAAAATCAGATCAAGAAGCTAATCAATAATGAGTGCCTTCAGTTCCTTGAATCGTTGCTGCAAGCGTTAAAGCTTGGGAGCTGCCAATCAAGAGCATACGTAACACTGCTTTTGAAATCGACATTTACGGTTTCAAATCCGATCCAGTTGATCAGCGTGAAAACCAAAATGTTGTTTGAAATCACGAGTGATACACAACCGTATATCGCAGCAGACTTAGAAGCCGGCATTGAAGCTGGTGGTTAA 333 0.4054 MIKKNNSAEEEQRDLNETAIEILFQLDLSENQIKKLINNECLQFLESLLQALKLGSCQSRAYVTLLLKSTFTVSNPIQLISVKTKMLFEITSDTQPYIAADLEAGIEAGG 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02362 110 ProSiteProfiles Leucine-rich repeat profile. 22 43 IPR001611 GO:0005515
Aip04g02362 110 PANTHER WDSAM1 PROTEIN 7 92 IPR045185 GO:0061630
Aip04g02362 110 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 7 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02362 Aip-Chr4 107511470 107511802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02362 10 90 U-box Gene Family AT3G52450 32.927 2.29e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02362 - K18808 gmx:100778012 98.5969