Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02348 ATGCGGGGGTTTGCGGCGTTAAAATATCAGCGGTTCAAAAAGACAGCTGCTAAGTGGCAAGATCTCATTTCGCGTAGTCATGGTCTTCCGCGCAGTCACAGTCGCAATCGCCCTCCACGCAGTTTGCAGCTGCCATCATCCTCCGCGCAGTTCCCACCCGCTCACGGGGCAAAGGTTTTTGCTGCTGTCATGCAGGATTTACTTACAAAAGGAATAAAAAATGCTCGAAATGCTATCATATATGGATGTTCAGCTGGAGGATTGACTTCGATATTGCATTGTGATTGCTTCTGA 294 0.483 MRGFAALKYQRFKKTAAKWQDLISRSHGLPRSHSRNRPPRSLQLPSSSAQFPPAHGAKVFAAVMQDLLTKGIKNARNAIIYGCSAGGLTSILHCDCF 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02348 97 MobiDBLite consensus disorder prediction 36 50 - -
Aip04g02348 97 MobiDBLite consensus disorder prediction 24 51 - -
Aip04g02348 97 Pfam Pectinacetylesterase 55 97 IPR004963 GO:0016787
Aip04g02348 97 PANTHER NOTUM-RELATED 55 97 IPR004963 GO:0016787
Aip04g02348 97 PANTHER PECTIN ACETYLESTERASE 55 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02348 Aip-Chr4 107201652 107202992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02348 45 97 Carbohydrate Esterase AT4G19420 54.717 1.08e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02348 K19882 - ini:109153283 72.7886