Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02328 ATGAACTCACCTTCACAGCTAGGTTGGCAAGCGAGTGGTGATGATCCGCGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCCAGACTTGAGTAGCAACAATCTTGGAGGTGGCATACCATACCAGCTTCCTCCAAATATGCAGTGCTTAAATCTGGCTTATAATAACTTCACTGGGGCAATCCCTTACTCTATTTCTGATATGACCTCTCTTACAGACCTGTGTGTAATTATCTTCTTGAGCATTTATCATAATAATACCTTATCAACCAGCTCCATGAGCTATTGGAGTAACTTTTTTTATTGTTTTTGA 402 0.398 MNSPSQLGWQASGDDPRGQYWKGITCSNNRVTEIKLSNLKLTGTLPYGLQPLTSLTNPDLSSNNLGGGIPYQLPPNMQCLNLAYNNFTGAIPYSISDMTSLTDLCVIIFLSIYHNNTLSTSSMSYWSNFFYCF 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02328 133 Gene3D Ribonuclease Inhibitor 1 98 IPR032675 -
Aip04g02328 133 PANTHER OS01G0253100 PROTEIN 1 112 IPR045271 GO:0004714|GO:0006468
Aip04g02328 133 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 1 112 - -
Aip04g02328 133 SUPERFAMILY L domain-like 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02328 Aip-Chr4 106415792 106416546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02328 1 115 Strubbelig Receptor Gene Family AT1G53730 58.120 1.67e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02328 - - aip:107636872 283.108