Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02321 ATGAATACATTATCATTTTCTTTACTATCACCACAACTATCACCATCACTATCTTCATTGTCTATACCCACCACCATCACCAACGATATCAACTTTTTCAATGATACCTTTTTCGAAAAGTCACTTTTTGGTTTGACAAATGTTGGAGACTTTGGTCCTTCTTTGTATGAGTGGTTAGGCATAGCTGAAGAAGATGCTTCGCTGGTCGAAAGGCGAGTAAAACATCCTCTTCCTTCTTTGCCTCCAGACGCAGTTATTCTAGAATCGTCTGGAATAGTTGCACATTCACAAAATCCAGCCATTTCCATAATCCCAACCAATAATTCTGATGTCGTCATTGCTAACAACAGCAACACCAATAACAGAGTTGGGCTTAAACGTTCAGCAAAATCTATTGTCAGTGGAAATGTAAATCTCCGAGGCGATGAACTAGATGACGAAAAAAATAATATTACAACTAGGTTGAAACTTCGAGAATCTACGATGGCATCGATTGCAGCTACCATGAATATGAATAATAAAAGGAATAAAAATAATCTTTCGAAATTTGCTTTCTTGACAAAAAGCGAATCTAAAAACCTTGAAGATGGATATAAATGGTGTAAGTATGGCGAAAAATCACTCAAAAAAAGCCCCTTCCAAAGGAGCTACTATCGTTGCACTACAATTGGTTGCAATGCGAAAAAGAGAGTGGAGAGGTGCCTGAATGACCCCACCCATGCACTAACTACCTATGAAGGTTTGCACACTCATAATTTGCCACCAATCCTCCCTCCTCCGTCAAGATCTTTTGGTCTCTACAACAACTCCACCCTTAGTTCCATACTTGGTAGAGGCAGAGGTATACAAAAAGGTGTAGCTTCAGATACAGGTGCAGGTGCAAGGGCAAGATATCATGCTAATAACGCTATTACTAGTGTTAATGCTAGAACTGACAGTGGTAGTAGTGTTAATGACGTTGGCTCGCTTGAGAATATTGGTACCGGACTGCTTGAGGATATTATTAATTTGTCTTCAGTAGCACCTCAATATCATCATCATCGTTATCAACCAACATCTCTATAG 1065 0.3925 MNTLSFSLLSPQLSPSLSSLSIPTTITNDINFFNDTFFEKSLFGLTNVGDFGPSLYEWLGIAEEDASLVERRVKHPLPSLPPDAVILESSGIVAHSQNPAISIIPTNNSDVVIANNSNTNNRVGLKRSAKSIVSGNVNLRGDELDDEKNNITTRLKLRESTMASIAATMNMNNKRNKNNLSKFAFLTKSESKNLEDGYKWCKYGEKSLKKSPFQRSYYRCTTIGCNAKKRVERCLNDPTHALTTYEGLHTHNLPPILPPPSRSFGLYNNSTLSSILGRGRGIQKGVASDTGAGARARYHANNAITSVNARTDSGSSVNDVGSLENIGTGLLEDIINLSSVAPQYHHHRYQPTSL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02321 354 SUPERFAMILY WRKY DNA-binding domain 187 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g02321 354 Gene3D WRKY domain 179 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g02321 354 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 107 336 - -
Aip04g02321 354 Pfam WRKY DNA -binding domain 195 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02321 354 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 107 336 IPR044810 GO:0003700
Aip04g02321 354 ProSiteProfiles WRKY domain profile. 189 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02321 354 SMART WRKY_cls 194 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02321 Aip-Chr4 106126634 106128113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02321 172 279 WRKY Transcription Factor Family AT2G47260 52.778 2.32e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip04g02321 WRKY 1.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02321 - - aip:107636875 657.136