Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02316 ATGCGTTCTTCAGTATCTGAGTTTCTAGTTCTGCAGGTAAAAGAAGAGACACAGCAACTTGCTCGAATTTTTGAAACATTTAGGGCTTTCAAGGTTGAACAATTGATACGTTACATTGTTGAAGAAGCTGCTGAGGATGCTGAAAAGAAGCGAATTTTCAAGTTCCCTTTTATTGCTTGTGAGATATTCACCTGCGAAGTTGATGCTATACTCACGACTCTTGTAGAGGATGAGGAAAGGGCAGAAATTGGAGTTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTAATATTGTCCTCACTGAACCTGGTCTTAGTGTCATTATTAGTGCAGTGCTCACTAGCAGGGCAATTTTTCAAAGGATGAAGAACTATATTGTTAGTTTCCTTGCATACAGAATTTAA 408 0.3922 MRSSVSEFLVLQVKEETQQLARIFETFRAFKVEQLIRYIVEEAAEDAEKKRIFKFPFIACEIFTCEVDAILTTLVEDEERAEIGVVADATDAARSASNIVLTEPGLSVIISAVLTSRAIFQRMKNYIVSFLAYRI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02316 135 Gene3D - 105 130 - -
Aip04g02316 135 Gene3D - 80 104 IPR023214 -
Aip04g02316 135 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 30 81 IPR007587 GO:0019903|GO:0043666
Aip04g02316 135 PANTHER SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN 30 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02316 Aip-Chr4 105942229 105945861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02316 79 128 Primary Pumps ATPases AT1G80660 84.314 1.59e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02316 K15501 - vvi:100243011 89.7373