Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02266 ATGAGCGTTAATCTCTTTCTCTGTTTCTTCTCTTTCTCGTTCTTCTTCATCTTTTCAATACAAACCGTTTTTTCTCTCTCCCCCGACGGCGTTGCACTTCTCACTCTAAAATCCGCCGTGGACCCCGCCGGAGCCGCTGCGCTTGCCAATTGGAACGACGGAGACGCCACTCCGTGCGGATGGTCCGGGGTCAGCTGTAGTAACATCTCCGGCGACCCTGACCCCCGCGTTGTCGGTGTCTCCCTCGCCGGAAGGGGCCTCCGCGGCTACCTCCCATCAGAGCTCGGCACACTTCTCTACCTCCGCCGCCTCAATCTCCACTCCAACGCCTTCCGCGGCTCCATCCCCTCCCAGCTCTTTAACGCCACCGCGCTCCGATCCCTCTACCTCCACTCCAACAACCTCTCCGGCGACCTCCCTCCCTCCCTCTTCTCCCTCCGCCGCCTCCAGAACCTCGACCTCTCCGATAACTCCCTCTCCGGCTCAATTCCAAACTCTCTCCGCAACTGCTCACAGCTCCAGCGCCTTGTCCTCGCCAGGAACAAATTCTCCGGCAAGATTCCGGCGACGCCGTGGCCGGAGCTCCGAGAACTCATTCAGCTCGACCTCTCCGCGAACCTCCTAGAAGGTCCAATCCCGGACCAGATCGGAGAGCTTCAATCCCTCACCGGAACCTTAAACCTCTCGTTCAATCACCTCTCCGGCAACGTTCCAGAATCTCTCGGGAAACTTCCGGTGACGGTTAGCTTCGATTTGCGAAACAACAATCTCTCCGGCGAGATTCCCCAAACAGGATCGTTTTCAAACCAAGGCCCCACGGCGTTCCTCAACAACCCTAACCTCTGCGGTTTCCCGCTTCAAAAACCGTGTTCCGGTTCGGCACGGAGCGAACCGGGATCAAGCCCCGGTCCAAAAAGGGAACGGTCCGGCTCACGGTCTAATAAAGGGCTAAGCCCCGGTTTAATTGTTCTAATCTCAGTAGCTGATGCCGCTGGCGTTGCTCTAATTGGACTCATAATTGTTTACGTTTATTGGAAAAAGAAAGACGGTTGCAACGGGTGTAGTTGTACCGGTAAGGCCAAGTTTGGCGGTGGCGAAAACGGGAAAACGCGTTTTTGCTGTTCTTTGCCATGCATGAACGTTGGGGTGCTGAAGAGTGATGATTCTGAATTGGAGGAAGGTGAGAAAGGGGAGGGTGGAAGAGGGGAAGGGGAATTGGTGGCGATTGATAAGGGATTTAACTTTGAGCTTGATGAGTTGTTGAGGGCTTCAGCTTATGTTCTTGGGAAGAGTGGGTTGGGGATAGTGTATAAGGTTGTGCTTGGGAATGGGGTTCCTGTGGCTGTGAGGAGGCTTGGGGAGGGTGGTGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAGGCTATTGGGAAGGTCAAGCACCCTAATGTTGTGAAGCTAAGGGCTTATTATTGGGCACCTGATGAGAAGCTCTTGATCAGTGATTTCATCTCTAATGGCAATTTGACCACCGCTCTTAGAGGGAGAAATGGTCAACCAACTATGAACCTTCCATGGTCAACCAGGCTGAGAATTGCCAAAGGAGCAGCCAGGGGTTTGGCCTATCTCCATGAATGCAGTCCTAGAAAATTTGTTCATGGTGACATCAAGCCCTCCAACATTCTCCTTGATGGGGACTTCCAACCCCGAATTTCTGATTTCGGCCTTAACCGGTTGATCAGCATCACTGGCAATAACCCCTCCAATGGTGGCTTTATGGGAGGAGCTCTTCCTTACTTTAAGCCATCACAAACAGAACATACTAACAACTACAAGGCCCCTGAGGCCAAAGTTCCAGGCAGCAGACCAACCCAGAAATGGGATGTATATTCATTTGGAGTCGTGTTGCTCGAATTGCTTACTGGGAAGTCCCCTGATTCTACTCCTGCCCCATCAACTTCTATGGAAGTTCCTGATATGGTGAGGTGGGTGAGGAAAGGGTTTGAACAAGAAAGTCCGCTATCCGAAATGGTTGATCCTCCTTTGCTTCAAGAAGTGCATGCCAAAAAGGAGGTACTGGCTGTGTTTCATGTAGCATTGTCATGCACTGAGGGAGACCCTGAAGTCAGGCCTAGAATGAAAACTGTGTCTGAGAATCTAGAAAAGATTGGATCATAG 2160 0.5218 MSVNLFLCFFSFSFFFIFSIQTVFSLSPDGVALLTLKSAVDPAGAAALANWNDGDATPCGWSGVSCSNISGDPDPRVVGVSLAGRGLRGYLPSELGTLLYLRRLNLHSNAFRGSIPSQLFNATALRSLYLHSNNLSGDLPPSLFSLRRLQNLDLSDNSLSGSIPNSLRNCSQLQRLVLARNKFSGKIPATPWPELRELIQLDLSANLLEGPIPDQIGELQSLTGTLNLSFNHLSGNVPESLGKLPVTVSFDLRNNNLSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCSGSARSEPGSSPGPKRERSGSRSNKGLSPGLIVLISVADAAGVALIGLIIVYVYWKKKDGCNGCSCTGKAKFGGGENGKTRFCCSLPCMNVGVLKSDDSELEEGEKGEGGRGEGELVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNVVKLRAYYWAPDEKLLISDFISNGNLTTALRGRNGQPTMNLPWSTRLRIAKGAARGLAYLHECSPRKFVHGDIKPSNILLDGDFQPRISDFGLNRLISITGNNPSNGGFMGGALPYFKPSQTEHTNNYKAPEAKVPGSRPTQKWDVYSFGVVLLELLTGKSPDSTPAPSTSMEVPDMVRWVRKGFEQESPLSEMVDPPLLQEVHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSENLEKIGS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02266 719 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 718 - -
Aip04g02266 719 CDD STKc_IRAK 428 717 - -
Aip04g02266 719 Pfam Protein kinase domain 427 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02266 719 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Aip04g02266 719 SUPERFAMILY L domain-like 29 287 - -
Aip04g02266 719 ProSiteProfiles Protein kinase domain profile. 422 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02266 719 Gene3D Ribonuclease Inhibitor 192 292 IPR032675 -
Aip04g02266 719 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Aip04g02266 719 Gene3D Phosphorylase Kinase; domain 1 407 497 - -
Aip04g02266 719 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Aip04g02266 719 MobiDBLite consensus disorder prediction 290 314 - -
Aip04g02266 719 SUPERFAMILY Protein kinase-like (PK-like) 427 714 IPR011009 -
Aip04g02266 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Aip04g02266 719 SMART serkin_6 426 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02266 719 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 718 - -
Aip04g02266 719 Gene3D Transferase(Phosphotransferase) domain 1 498 719 - -
Aip04g02266 719 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Aip04g02266 719 Pfam DNA binding protein S1FA 313 347 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02266 Aip-Chr4 104050622 104055190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02266 24 717 Receptor kinase-like Gene Family AT1G67510 69.633 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip04g02266 Pkinase 2.6e-32 CL0016
TF S1Fa-like Aip04g02266 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02266 - - gmx:100795021 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02266 04 104050622 104055190 Aip02g02371 02 96756690 96761269 PCT