Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02255 ATGGCGAAAGGGTGTGCTTCTGGAGGGAAGAGGGTTTGCTATGCGCGAAGTGTCTCGTGGGGCGTTACAAAATCCCCTCATTTCACATATTCTTCCCCGCACCTCCACACCCTCCCCTCCAAATGCTCTATTGGCAGTGCTTCTCAGCCTTGCACCGCCATCGCACCTTATGCCGCCGCCACACCTTGTGTTGTCGCCGCACTGAACCTCCATTGCACTGAACTTCCATCGCCCCGTCACACCCCTTCCCGGCTCTTCTATGTGTGTTGCTCGCCGGCACTAACCATAACCAATGGCGTCCACCGAGCAGCTATTGAAGAAGCGAAAGCACGACACTCTTCCGGAATCTCCACTGCCACACCACCGCCGCTAGCACCGCCGCCACAATCTCCTCAAACCCTAGCTCGTCTGCCTACTCCTCCTCCTCCGCCTCTGTCACGAGATGAGGTCGTCACCAAGCAGAGGAACAAAGATGAGAGCTTCTTCGCTCTCGTCAATGCTTCCAGAGGTGGAGCTGCCAGGGAGGCTACAGTGTTAGGGTATCATATTACTCCCTTGTTTTTGTACTATGCGTATCACGGACCTATTTTTAGAGTCTTACTCAGATTAAATCGTGGCAAGATTCATGACAGTAGGCATTATGGCTATATTGGTTACTGCCACAAATGTGGAAATTCTCATGAATATTCTCGGGATCAACTTGGTCAGATTAGTTGCTCTTGTAGTATGCCAATGAGATTTATCTCAGCTGAATTTGGAGCAGACCCTACCAAGGTTCAATATATGACCTGGAGGATGGCCCCAGGCTTAAATGCTCCTCCTAGTGACAAGGTTACCATATTTGGTGATGGGAACACAAAAGGCGTATTTGTTAAGGAAAATGATGTCGCTGCCTTCACTATTAGCACAGTTGATGAACCCCGTACCTTGAACAAAGTGTTGTACTTGAGACCCTCAGAAAACGTTTATTCTCTGAATGAACTAGTCGAGATGTGGGAAACTAAAATTGGGAAGAAGCTTGAGAAATCACACGTCTCAGAAGAAGAACTGATCAAGAAAATCGAAGAAGAGCTGTTCGACCAAGAAATGGTCTTCCTGAGTCTATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCCTAATGCTATATCAGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGGCAACTCATGCAGATTTTGTTGTATCCTATCAAAAGTATGCCAAAAGCATCAAGAATCCGGTGACCATTGGCACAAGATTCAAAGTGAAATTTGAAATGGATGAATCACCTGAAAGAAGGTGTACTAGTGGTATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGCCCCAAATCGAAAGTCACTGGAACTAGACCAGATGTTAAGGATGTTCAAAGTAGCGAGCCAGGATTTACCAGTGCTACTCCATCCACTTTTGAATCAGTCAGATCTTCAGGACAGTTAGAGTCAATGCCGCCTCCACAGCAGCAATCGCAGCCACAAACTCAGACGCAGACACAGCCACCATCGTTGCCGCCACTGCCGCCGCACAGTGATCAGAACAATGAAGGAACTAGATCTAAGAGGAGGAGAGGCAAAGCAAATGTTGCTAATGAGTCACCTAATCCTGGCCAGTCTGAGGAACAAGGTACAGacaagctcttgctagaatga 1716 0.4662 MAKGCASGGKRVCYARSVSWGVTKSPHFTYSSPHLHTLPSKCSIGSASQPCTAIAPYAAATPCVVAALNLHCTELPSPRHTPSRLFYVCCSPALTITNGVHRAAIEEAKARHSSGISTATPPPLAPPPQSPQTLARLPTPPPPPLSRDEVVTKQRNKDESFFALVNASRGGAAREATVLGYHITPLFLYYAYHGPIFRVLLRLNRGKIHDSRHYGYIGYCHKCGNSHEYSRDQLGQISCSCSMPMRFISAEFGADPTKVQYMTWRMAPGLNAPPSDKVTIFGDGNTKGVFVKENDVAAFTISTVDEPRTLNKVLYLRPSENVYSLNELVEMWETKIGKKLEKSHVSEEELIKKIEEELFDQEMVFLSLLLVTRVVIPISFLLWPNAISAKSMFHVFYSPRATHADFVVSYQKYAKSIKNPVTIGTRFKVKFEMDESPERRCTSGIVTGMSDLDPYRWPKSKWSPKSKVTGTRPDVKDVQSSEPGFTSATPSTFESVRSSGQLESMPPPQQQSQPQTQTQTQPPSLPPLPPHSDQNNEGTRSKRRRGKANVANESPNPGQSEEQGTDKLLLE 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02255 571 MobiDBLite consensus disorder prediction 120 147 - -
Aip04g02255 571 MobiDBLite consensus disorder prediction 473 519 - -
Aip04g02255 571 Coils Coil 337 357 - -
Aip04g02255 571 Pfam NmrA-like family 266 339 IPR008030 -
Aip04g02255 571 PANTHER AUXIN RESPONSE FACTOR 384 463 - -
Aip04g02255 571 MobiDBLite consensus disorder prediction 457 571 - -
Aip04g02255 571 Gene3D - 421 471 - -
Aip04g02255 571 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 384 463 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip04g02255 571 MobiDBLite consensus disorder prediction 110 149 - -
Aip04g02255 571 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 261 361 IPR036291 -
Aip04g02255 571 Gene3D - 260 373 - -
Aip04g02255 571 Pfam Auxin response factor 385 462 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02255 Aip-Chr4 103614007 103628121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02255 382 462 B3 DNA Binding Superfamily AT5G60450 71.605 2.55e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02255 - K00555 aip:107639678 169.088