Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02248 ATGCTGCAAAGGTTAATTTTGACAAGGCACGTGAGTGTTTCTAGTGAGCTCTTGATGAGGTCCAGCATTGCACATGGAGATCCACAAAAATGGGCTTGGTCAGATGACTGGTGGTGGGGCATCCTCTACACCTTCAAAAATAAAGGAGTTGATATTTATGGGATTCTTCTTCTGAGAACTTTGATTGGAAAGATATTTGGCAGCATTGGATCAGTGAGAGGAGGCCTTGCTTTAGGTAAAGAGGGTCCTCTTGTCCATACTGGTGCTTGTATTGTTTCTTTGCTTGGACAAGGTGGTTCCACTAAGTATCATATAAATTCAAGATGGTTTCAACTATTCAACAGTAATCGAGATCGCGAGATCTGTACGAACTGCAATGGCATGGTGTAA 390 0.4231 MLQRLILTRHVSVSSELLMRSSIAHGDPQKWAWSDDWWWGILYTFKNKGVDIYGILLLRTLIGKIFGSIGSVRGGLALGKEGPLVHTGACIVSLLGQGGSTKYHINSRWFQLFNSNRDREICTNCNGMV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02248 129 Gene3D Clc chloride channel 43 125 - -
Aip04g02248 129 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 48 127 - -
Aip04g02248 129 Pfam Voltage gated chloride channel 56 119 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aip04g02248 129 SUPERFAMILY Clc chloride channel 53 109 IPR014743 -
Aip04g02248 129 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 48 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02248 Aip-Chr4 103256487 103259085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02248 49 119 Ion Channels AT5G26240 85.915 3.45e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02248 K05016 - gmx:100800439 134.806