Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02226 ATGGATGTTGATTCGGAACCACTCAATTCAGAAGAGAACGTTGAAGATTGCTTGATGACTGGTGTGGAAGAGACTGTAAATTGCACTTGTGATTGCGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGATAGTCGATGATATTATAAACCAGAGATTTGAAACATCGGATGCAGCTTATCACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTTCGGAGTTCGCAAGGGTGATACAGCGCGTGGAAAAGATGGAACACAACGCAGAAGGCGATTTTTTTACAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAGAGGGAGCATAAAGCGCTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTATCCCCCAATGCTTGGTACACCTAATTCCAAACCACCGTGGGATGAATGAGGCTCAAAAAGCTCAGGCAAACACCATGCACGATAATGGTCTTCCAAGCGCTAAGATAATGGGACTAATGGTAGGCCAAGCCGGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATGGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATCTATTTTGGGCAGATGGCATTTGTAGGGCGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCAGAAAAATAAGTACATAAGACCGTTGGTTATCTTCTCGGGTTGTAACCAACACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACGGCAACATATACGTGGTTGTTGCAAAACTTTCTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGATGGTGATGAGGCAATGAAGGCAGCAATTCAAGAAATCTTCCCAAATGCAACTCACCGATTATGTGGCTGGCACATTCAGAAAAATGTAACGGCAAACATAAAAATCAAAGGTTTTTCCGACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGAATGAATTTGAAGAATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTACTAAATGAGTATCAAAAGAGGAAAAGCTGGGCAAGCACCTACTTGTGA 1284 0.4315 MDVDSEPLNSEENVEDCLMTGVEETVNCTCDCGGSSSKCVVVIVDDIINQRFETSDAAYHLYVRYARCVGFGVRKGDTARGKDGTQRRRRFFYNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDTKTSAWRVKKLVEKHNHDLIPQCLVHLIPNHRGMNEAQKAQANTMHDNGLPSAKIMGLMVGQAGGYANVGFTKKDLDNHIERTRRAKLIGGDSNATISYLLGKADVDPMAMARYSATDESRLANLFWADGICRADYQCFGDVLAFDTTYQKNKYIRPLVIFSGCNQHRQTCIFGFALIENEQTATYTWLLQNFLDVMLNKSPSVVVTDGDEAMKAAIQEIFPNATHRLCGWHIQKNVTANIKIKGFSDDFRRCLYAPWHPNEFEEYWENMIKKYGLEENEWVLNEYQKRKSWASTYL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02226 427 Pfam FAR1 DNA-binding domain 61 150 IPR004330 -
Aip04g02226 427 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 427 IPR031052 GO:0006355
Aip04g02226 427 Pfam MULE transposase domain 272 366 IPR018289 -
Aip04g02226 427 PANTHER OS02G0262500 PROTEIN 46 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02226 Aip-Chr4 102967403 102968686 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02226 MULE 3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02226 - - ahf:112717474 792.341