Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02221 ATGGAGATGGAAACGACAGAAGTGAGTTCAGCTAATGACGATGATTGTAGCTTGGACCAAGAGATGGAAACAGAAAAATGTAAATGTTGTGGTTGCAAACAGTGTGAAATTGTTATCGCTGTAGATATTATTAATCATACATTTCCAATATCTGAGGTAGCATATGATGTGTATGTGAGATATGCCAAATGTGTTGGCTTTGGAATTCGGAAGGGAGATTTTGTGAAAACCAAAGATGGTTGTTACTCAAGGCGAAGGTTTTTTTGTAATAGGGCCGGATTGAGAGAGAAGAAATACTATGACAATATTTCACGAAAAGGGGAACAAAGGGCTAAGACACGAACTAATTGTCAAGCTAAATCGTGTTTATACTTTGATAAAAGTGCAACTGTTTGGAGGGTTAAGAATTTGTTCGATGAACATAACCATGACTTAGTTCCACAATGCATGGTTCACCTAATTCCGAACCATCGGTAG 477 0.3774 MEMETTEVSSANDDDCSLDQEMETEKCKCCGCKQCEIVIAVDIINHTFPISEVAYDVYVRYAKCVGFGIRKGDFVKTKDGCYSRRRFFCNRAGLREKKYYDNISRKGEQRAKTRTNCQAKSCLYFDKSATVWRVKNLFDEHNHDLVPQCMVHLIPNHR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02221 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 158 - -
Aip04g02221 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 36 158 - -
Aip04g02221 158 Pfam FAR1 DNA-binding domain 57 147 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02221 Aip-Chr4 102889534 102890010 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02221 FAR1 3.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02221 - - aip:107636931 328.946