Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02212 ATGATCAATTCGCAAGAATCTTGTGCCGTTGTAAACAATGCAAGACACAGGTGGCAAGTGGCCTTTGCTGCTATTTACTCCTATAGAGCTATAGCTTCTCTTTTCAATGAAGTTGCTGCCAAGAGAAATCACAATACTCCATCATCATTTGTTGCCATCCATGTTGGTGAGCCAGACTTGTTCTTTTCAGATCTTAACAAGACACGCATAAGCAACCTTGTGAAGGACAAAGATCATGGCACACTAGCTCATCAATTTGGAGGTGTAGATGGTCTTGTAAGGTTGCTTCAAACCGATGAAAGGAACGGCATCAATGGAAGCCCGGAAGAAATTTCCTGTCGACACAAAGCGTTCGGGTTCAACAACAATTATCATAAGCTAACAACAAAGAGCTTCCTCCACTATGTGCTATCAGTAATGAAGGATCCAATACTCATTATCCTATTGGTATGTGCCACCCTGTCTCTTGTTTTCAACATAAGGGGAGATGGATTCATACATGGATGGTATAATGGTGGAAGCATTTTCATTGCTGTTCTTGTTGTTGTTGCCGTTTGTTCAATTAGTCACTTCTGGCCCTATAGACACTTCAATAAGCTGCTACAGATGAGCAATGAAAACCAGTTTATTCAAGTAGTAAGAAATGGGCAGGAGCAGCAGGTTTTGGTATCTGACATCGTCGTCGGAGATGTTGTTTGCTTAAGGAATGGCTGCCAAGTTCCTGCAGATGGAGTTCTTTTGAGTTCCAATTCATTATTGCCATTGCTTGTGGATGAATCAACCTTGGGAGTGGAGCACCAAGTCGAGGTTAGTAAAGGCACAAATCCTTTCTTGTTTTCTGGGACAAAGGTTGATCATGGCCATGGTAAGATGCTAGTAACTTCAGTAGGTGAAAACACCAAATGGAATGAGATAATGAGCCTTCTAGGCCAGGAACCTCACAAATGGAGATCTCTTGAAAGCCGGCTTATAGCACTGACCAGAATAACAAGTATAATTGGATCTGTAGTAACAGCATCCACATTGATTGTTCTGCTAGTTCGGTTTTTCTCTGGTTATATGAGAAATAATGATGGTTCACTAATGTTTAGATCCGGCAAGAGTAACGCCTATGATGCTTGGCCTAAAGTAGTTGGGCTTATGGTGAGCGCAGTGGCCGTTGCAACATCGGCAATCCCTGAAGGGTTGCCTTTGGCTGTGGCAATTACAGTTAGCTACGCAGTGAAGAGAATGCTAAAGAATCAAGCATTATTCAGACAGTTCTCAGCTTGTGTTCAGCTTGCCTCAACCACTGTTATATGTACTGACACCAATGAAATACTAACACCCGTGAAACAAAACAAGTTCAAACTTTGGTTAGGTAAAAAATTCTTTATCCATGAAGAGGGAGAGGATAGTTCTTCATCATTATCACAGTTAATAGCAGCGAACATTCGACACCTGGTCTGCCTGGGGATTGGTCTAGGACATATTTCAAATGAGGATGACATTATCTGTTGGGCCGCTACGGAATTAGGCATGGATGCCCAAGAGTCAAGGGAAGGTTTCAATGTTCTCCATGTTGAAACATTGAACGAAGAAATGAAGCAAAGAAAAGTTCTTTTAAGGAATGAAGGTGACCACACAATTCATGTGCATGTGAACGGAAAAGCCGAGGGGATACTTTCCAAGTGTTCATATTATTATGGAGTTAAAGGGGATGTGAAAGCCTTAGATAATGACACAAGGAGAAATGTAGAATGTGCAATGCAATTGATGGAACAGGAACGGTTCAAATGCATAGCATTTGCACATAAAGCACTCAACGACATTTCTGAATCCCATCCACGGATTGAAGATGACACATTAGTCTTACTAGCACTGATAGGTTTCAAGGATCTCATCCATTCTGGGGTGCCGGAAGCTGTACAAGATTGCAAACAAGCAGGAGTGAACATCAAACTAATTACAAGCGAGGATGTTTCAACAGCAAAAGCTATAGCTTCTGAGTGTGGCATCCTTCATCCCAATCAAGAATTCTGTAATGGACAGGTAATGGAAGCGCTGGAATTTCGAAACTATTCGCATAGCGAAAGACTAGATATTGTTGAACAAATCTGCGTGATGGCCAAGGCTAGTTCGTCTGACAAGCTCCTCCTAGTGAAATGCTTGAAAAAAAAGGCCATGTGGTTACAGTCACCGGAAACAGCCCCGGCGATGCCCCAGCCTTGGTAG 2214 0.4232 MINSQESCAVVNNARHRWQVAFAAIYSYRAIASLFNEVAAKRNHNTPSSFVAIHVGEPDLFFSDLNKTRISNLVKDKDHGTLAHQFGGVDGLVRLLQTDERNGINGSPEEISCRHKAFGFNNNYHKLTTKSFLHYVLSVMKDPILIILLVCATLSLVFNIRGDGFIHGWYNGGSIFIAVLVVVAVCSISHFWPYRHFNKLLQMSNENQFIQVVRNGQEQQVLVSDIVVGDVVCLRNGCQVPADGVLLSSNSLLPLLVDESTLGVEHQVEVSKGTNPFLFSGTKVDHGHGKMLVTSVGENTKWNEIMSLLGQEPHKWRSLESRLIALTRITSIIGSVVTASTLIVLLVRFFSGYMRNNDGSLMFRSGKSNAYDAWPKVVGLMVSAVAVATSAIPEGLPLAVAITVSYAVKRMLKNQALFRQFSACVQLASTTVICTDTNEILTPVKQNKFKLWLGKKFFIHEEGEDSSSSLSQLIAANIRHLVCLGIGLGHISNEDDIICWAATELGMDAQESREGFNVLHVETLNEEMKQRKVLLRNEGDHTIHVHVNGKAEGILSKCSYYYGVKGDVKALDNDTRRNVECAMQLMEQERFKCIAFAHKALNDISESHPRIEDDTLVLLALIGFKDLIHSGVPEAVQDCKQAGVNIKLITSEDVSTAKAIASECGILHPNQEFCNGQVMEALEFRNYSHSERLDIVEQICVMAKASSSDKLLLVKCLKKKAMWLQSPETAPAMPQPW 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02212 737 Pfam Cation transporter/ATPase, N-terminus 87 155 IPR004014 -
Aip04g02212 737 PANTHER CATION TRANSPORTING ATPASE 10 720 - -
Aip04g02212 737 Pfam E1-E2 ATPase 210 414 - -
Aip04g02212 737 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 627 IPR023299 GO:0000166
Aip04g02212 737 Gene3D - 107 310 - -
Aip04g02212 737 Gene3D - 138 430 - -
Aip04g02212 737 Gene3D - 431 443 IPR023214 -
Aip04g02212 737 Gene3D - 628 720 IPR023214 -
Aip04g02212 737 SUPERFAMILY HAD-like 613 720 IPR036412 -
Aip04g02212 737 PANTHER CALCIUM-TRANSPORTING ATPASE 10 720 - -
Aip04g02212 737 SUPERFAMILY Calcium ATPase, transmembrane domain M 86 428 IPR023298 -
Aip04g02212 737 SUPERFAMILY Calcium ATPase, transduction domain A 208 308 IPR008250 -
Aip04g02212 737 Gene3D - 523 627 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02212 Aip-Chr4 102588313 102590526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02212 13 721 Primary Pumps ATPases AT3G63380 39.189 2.19e-150 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02212 K01537 - sind:105171288 555.058