Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02195 ATGAAGATGGTGGAAGAAGAAAGCCATGGATCAGAATGTTCTAAGACAAGAAGCCCTTGCAATGATGATAATAATAATGAAGATGATGGCTATTGTGAAGATGAGAGTGAAACCAATAATGAAGAAGAAGAAGAAGATGAGAGTAGTTATAAGAAACAATACAAGAACAACAATGGTGGTGGTGGAGGGTGTTCAAGCAACAGCACAGTGGAAGAGAATAACGAGAAGAAGAGTTCATCAACATCAGTAAGACCTTACGTTAGATCCAAGTTGCCAAGGTTGCGTTGGACCCCTGATCTTCATCTTCGATTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAGTTAATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAG 423 0.3853 MKMVEEESHGSECSKTRSPCNDDNNNEDDGYCEDESETNNEEEEEDESSYKKQYKNNNGGGGGCSSNSTVEENNEKKSSSTSVRPYVRSKLPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02195 141 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 28 141 IPR044848 GO:0003700
Aip04g02195 141 SUPERFAMILY Homeodomain-like 90 141 IPR009057 -
Aip04g02195 141 MobiDBLite consensus disorder prediction 1 85 - -
Aip04g02195 141 MobiDBLite consensus disorder prediction 26 44 - -
Aip04g02195 141 MobiDBLite consensus disorder prediction 53 85 - -
Aip04g02195 141 Gene3D - 91 141 - -
Aip04g02195 141 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 28 141 - -
Aip04g02195 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 141 IPR017930 -
Aip04g02195 141 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 141 IPR006447 GO:0003677
Aip04g02195 141 Pfam Myb-like DNA-binding domain 94 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02195 Aip-Chr4 102053679 102054284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02195 69 141 G2-like Transcription Factor Family AT2G42660 68.750 2.38e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip04g02195 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02195 - - adu:107484994 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02195 04 102053679 102054284 Aip04g02195 04 102053679 102054284 ECH