Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02193 | ATGGCTACCGCTACTGAGAAAGCCATTGGCATCGATCTCGGCACCACTTACAGCTACGTGGCCGTGTGGCAGAACGACCGCATAGAGATCATCGCCAACGACCAAGGCAACCGAACCACTCCTTCCTACGTTGCCTTCACGGACACTGAGCACCTCATCGGAGATGCTGCCACCCACAGAACACGGTGTTCGACGCCAAGCGCCTCATTAGTCAGGCAGGCCACCAAGGACGCTAACGCCATTGCAAGCCTCAACGTCATGAGAATTATCAACGAGACAACCGCTGTTGCCTACGGCTTAGACAAGAAGGCCTCCAAAACTGGCGAGAAGAACATCCTCATCTTCGACCTCGGGAGCGGCACCTTTGACGTGTCTCTCCTGACTATCGAGAAGGACATCTTTGAGGTGAATGCCACTGCCGGTGACACCCACTGGGGGGCGAGGATTTCGACAACAGGCTGGTGA | 465 | 0.557 | MATATEKAIGIDLGTTYSYVAVWQNDRIEIIANDQGNRTTPSYVAFTDTEHLIGDAATHRTRCSTPSASLVRQATKDANAIASLNVMRIINETTAVAYGLDKKASKTGEKNILIFDLGSGTFDVSLLTIEKDIFEVNATAGDTHWGARISTTGW | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02193 | 154 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 11 | 18 | IPR018181 | - | |
Aip04g02193 | 154 | Gene3D | - | 70 | 112 | - | - | |
Aip04g02193 | 154 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 114 | 127 | IPR018181 | - | |
Aip04g02193 | 154 | Gene3D | - | 1 | 69 | - | - | |
Aip04g02193 | 154 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 5 | 60 | IPR013126 | GO:0005524|GO:0140662 | |
Aip04g02193 | 154 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 72 | 147 | IPR013126 | GO:0005524|GO:0140662 | |
Aip04g02193 | 154 | SUPERFAMILY | Actin-like ATPase domain | 7 | 99 | IPR043129 | - | |
Aip04g02193 | 154 | Gene3D | - | 113 | 151 | - | - | |
Aip04g02193 | 154 | Pfam | Hsp70 protein | 72 | 147 | IPR013126 | GO:0005524|GO:0140662 | |
Aip04g02193 | 154 | Pfam | Hsp70 protein | 8 | 60 | IPR013126 | GO:0005524|GO:0140662 | |
Aip04g02193 | 154 | SUPERFAMILY | Actin-like ATPase domain | 107 | 148 | IPR043129 | - | |
Aip04g02193 | 154 | PRINTS | 70kDa heat shock protein signature | 7 | 20 | - | - | |
Aip04g02193 | 154 | PRINTS | 70kDa heat shock protein signature | 35 | 47 | - | - | |
Aip04g02193 | 154 | PANTHER | SHOCK PROTEIN, PUTATIVE-RELATED | 5 | 60 | - | - | |
Aip04g02193 | 154 | PANTHER | SHOCK PROTEIN, PUTATIVE-RELATED | 72 | 147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02193 | Aip-Chr4 | 101876992 | 101877662 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02193 | 8 | 60 | Calmodulin-binding Proteins | AT3G12580 | 83.019 | 5.68e-25 | 97.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02193 | K03283 | - | psom:113278701 | 149.443 |