Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02193 ATGGCTACCGCTACTGAGAAAGCCATTGGCATCGATCTCGGCACCACTTACAGCTACGTGGCCGTGTGGCAGAACGACCGCATAGAGATCATCGCCAACGACCAAGGCAACCGAACCACTCCTTCCTACGTTGCCTTCACGGACACTGAGCACCTCATCGGAGATGCTGCCACCCACAGAACACGGTGTTCGACGCCAAGCGCCTCATTAGTCAGGCAGGCCACCAAGGACGCTAACGCCATTGCAAGCCTCAACGTCATGAGAATTATCAACGAGACAACCGCTGTTGCCTACGGCTTAGACAAGAAGGCCTCCAAAACTGGCGAGAAGAACATCCTCATCTTCGACCTCGGGAGCGGCACCTTTGACGTGTCTCTCCTGACTATCGAGAAGGACATCTTTGAGGTGAATGCCACTGCCGGTGACACCCACTGGGGGGCGAGGATTTCGACAACAGGCTGGTGA 465 0.557 MATATEKAIGIDLGTTYSYVAVWQNDRIEIIANDQGNRTTPSYVAFTDTEHLIGDAATHRTRCSTPSASLVRQATKDANAIASLNVMRIINETTAVAYGLDKKASKTGEKNILIFDLGSGTFDVSLLTIEKDIFEVNATAGDTHWGARISTTGW 154
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02193 154 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Aip04g02193 154 Gene3D - 70 112 - -
Aip04g02193 154 ProSitePatterns Heat shock hsp70 proteins family signature 2. 114 127 IPR018181 -
Aip04g02193 154 Gene3D - 1 69 - -
Aip04g02193 154 PANTHER HEAT SHOCK PROTEIN 70KDA 5 60 IPR013126 GO:0005524|GO:0140662
Aip04g02193 154 PANTHER HEAT SHOCK PROTEIN 70KDA 72 147 IPR013126 GO:0005524|GO:0140662
Aip04g02193 154 SUPERFAMILY Actin-like ATPase domain 7 99 IPR043129 -
Aip04g02193 154 Gene3D - 113 151 - -
Aip04g02193 154 Pfam Hsp70 protein 72 147 IPR013126 GO:0005524|GO:0140662
Aip04g02193 154 Pfam Hsp70 protein 8 60 IPR013126 GO:0005524|GO:0140662
Aip04g02193 154 SUPERFAMILY Actin-like ATPase domain 107 148 IPR043129 -
Aip04g02193 154 PRINTS 70kDa heat shock protein signature 7 20 - -
Aip04g02193 154 PRINTS 70kDa heat shock protein signature 35 47 - -
Aip04g02193 154 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 5 60 - -
Aip04g02193 154 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 72 147 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip04g02193 Aip-Chr4 101876992 101877662 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02193 8 60 Calmodulin-binding Proteins AT3G12580 83.019 5.68e-25 97.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02193 K03283 - psom:113278701 149.443